Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g2479 ATGATTCCATTTCTAAAACATGTTGTTTTTGGGACCCCTTATCAGCAGTATGGTCAAATTGAAGACCCTCAGGCATTTCATAATGACCCTCTGGCGTGGTCGAGGCCACTGGTTAAGCATTACTGGGGCGAATTCTCCATGGCTGCAGTTCAGGCAAATGTGGATATGGAAGATAAGTGCCAAGTTGAAGTTGGCATTGATTCAATCTTTGTTGGAGTTTATGATGGCCAGAAAGGCGACACCGTTTCCATCTTGCTTAGAAATCATATCTTCCGTCAAATTATCGTGCTTATTCAGGAGAATAATAACAATATGAATAAGAATATTCTGGAGCGAGCTGTTGCCCGAATTGAGATAGCTTTTATGAGAGGGACGTTATATGCCGCCAATGTTGGAAACTCGCGTGCTGTACTCGGTTCTATGACGGATGTTGGTAATCTTAAAAGATTGGTCGTTAAACAGTTGGTTAGAGATCACAATTTATATGATGGAAATATTCAAAAACAAGTTAGAAACTTGCAGCCGGATACTAATGATGATTATAATGACAAGTATGTCTCCATGTTATTCATTAGAGACAGAGGTTTAATCGATACAACTAGATGCATAGGATATTCATATTTGAAGGAGGAGATCAGTGAAGGCGTCGAAATCCCAAGTTGGGAAAGAATGTGA 675 0.3985 MIPFLKHVVFGTPYQQYGQIEDPQAFHNDPLAWSRPLVKHYWGEFSMAAVQANVDMEDKCQVEVGIDSIFVGVYDGQKGDTVSILLRNHIFRQIIVLIQENNNNMNKNILERAVARIEIAFMRGTLYAANVGNSRAVLGSMTDVGNLKRLVVKQLVRDHNLYDGNIQKQVRNLQPDTNDDYNDKYVSMLFIRDRGLIDTTRCIGYSYLKEEISEGVEIPSWERM* 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g2479 224 SUPERFAMILY PP2C-like 37 209 IPR036457 -
Tpr2g2479 224 ProSiteProfiles PPM-type phosphatase domain profile. 41 224 IPR001932 -
Tpr2g2479 224 Pfam Protein phosphatase 2C 113 210 IPR001932 -
Tpr2g2479 224 Gene3D - 37 222 IPR036457 -
Tpr2g2479 224 PANTHER ALPHABET, ISOFORM E-RELATED 122 211 - -
Tpr2g2479 224 PANTHER ALPHABET, ISOFORM E-RELATED 24 122 - -
Tpr2g2479 224 PANTHER PROTEIN PHOSPHATASE 2C 68-RELATED 24 122 - -
Tpr2g2479 224 PANTHER PROTEIN PHOSPHATASE 2C 68-RELATED 122 211 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g2479 Tpr-Chr2 29730162 29731295 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g2479 31 209 PP2C-type Phosphatase Gene Family AT5G06750 34.928 9.94e-30 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g2479 K01102 - csv:101222146 131.724