Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g2474 ATGAAGAAAAAATGTGAACTATGCAAAAAACCAGCAAAATTGTTCTGTGAATCAGATCAAGCAAGTCTTTGTTGGGAATGTGATGCAAAAGTTCATACTGCAAATTTCATAGTCACAAAACATCACAGGTTTCTTCTATGTCATATTTGTCAATCTCTAACACCTTGGCATGGCACTGGACCTAAGTTTGTTCCCACAATCTCACTTTGCAATCACTGTGTTTCTGTTTCCAACAATAACAATGATCACCACCACCACCACGATGACGATGATGATCAAGATGAGGATATTGAGGATGAGGATGATGCTGATGATGAAGATGAAGAAAATCAAGTTGTTCCATGGAAATCTACACCTCCACCATCAGTTTCTTCTAGTTCTTCATATAGTGCAACTAGTACTACAAATTATTAG 414 0.372 MKKKCELCKKPAKLFCESDQASLCWECDAKVHTANFIVTKHHRFLLCHICQSLTPWHGTGPKFVPTISLCNHCVSVSNNNNDHHHHHDDDDDQDEDIEDEDDADDEDEENQVVPWKSTPPPSVSSSSSYSATSTTNY* 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g2474 137 MobiDBLite consensus disorder prediction 81 137 - -
Tpr2g2474 137 MobiDBLite consensus disorder prediction 92 109 - -
Tpr2g2474 137 CDD Bbox1_BBX-like 4 46 - -
Tpr2g2474 137 ProSiteProfiles Zinc finger B-box type profile. 1 46 IPR000315 GO:0008270
Tpr2g2474 137 MobiDBLite consensus disorder prediction 115 137 - -
Tpr2g2474 137 PANTHER B-BOX TYPE ZINC FINGER PROTEIN 1 129 - -
Tpr2g2474 137 Pfam B-box zinc finger 3 41 IPR000315 GO:0008270
Tpr2g2474 137 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 1 129 - -
Tpr2g2474 137 SMART bboxneu5 1 46 IPR000315 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g2474 Tpr-Chr2 29706587 29707261 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g2474 1 107 C2C2-CO-like Transcription Factor Family AT4G27310 49.091 1.32e-35 120
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Tpr2g2474 zf-B_box 2e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g2474 - - cam:101492786 150.984