Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g2447 ATGACCAGACACAAAAACTCTCAACATCTTCTTCTTCATCTTCTCTCAACAATTTTCTTCCTTCATTTCAACTCAATCTCCACCATTGATTTCATCTTCAACGGCTTCAATTCTTCAAACGTTCTTCTCTTTGGCAATGCAACAATCGATTCTCAAATTCTAACACTTACCCATCATCAATCTTTCTCTATTGGTCGTGCTCTTTACCCACAAAAAATTCCCACAAAAAACTCTTCTTTTGTATACCCTTTTTCCACTTCCTTCATCTTTTCAATGGCACCTTTTGAAGACACTCTTCCTGGTCATGGTTTAGTTTTCATCTTCACACCTGTTAAAGGAATCCAAGGTACAAGTTCAGCTCAACATCTTGGTCTTTTTAATCTAACTAACAATGGAAATTCCAACAACCATGTTTTTGGTGTTGAATTTGATGTTTTCATGAATCAAGAATTTGATGACATTAATAACAACCATGTTGGAATTGACATAAATTCTCTCAAGTCTTATGTTTCTCATGATGTTGGGTTTTGGCCTGATGATGGAAAAAGTGAAAAAGATAAGTTTTTTAAGAAATTGAAGTTGAATAATGGTGAAAATTATCAAGTTTGGATTGATTATGAAGATTCTCTAATTAATGTTACATTAGCAAAATTGGGTATGAAAAAACCTATTAGACCATTGTTGAATGTTTCTCTTAATTTATCTGATGTTTTTGAAGATGAAATGTTTGTTGGTTTTACTAGCTCAACAGGTCAATTAGTTGAAAGTCATAAGATTTTAGCTTGGAGTTTTAGCAATACAAATTTTTCATTGAGTGATGAACTTATTACTATTGGACTACCCTCTTTTGTTCTTCCAAAAGATTCAATTTTTAAGTCCAAAGGGTTTGTTGCCGGATTTAGTGTACTAGTTTTCTTTATTGTTTGTGTTTTGGTTTTGTTGGTACTGTTTTTGATTCAAAAGAAGAGAAAGAGAGAAAAGAAGAGAAGTGAAATGGAAGATTGGGAGTTAGAGTATTGGCCACATAGAATGTCTTATGAAGAAATAGAATCTTCCACAAAGAAGTTCTCTGAGGAAAATGTGATTGGAGTTGGTGGGAATGGAAAAGTCTACATGGGTGTTTTAAGAGGAGGTGTTATGATTGCTGTGAAAAACATTTCTCATGAGAATGATGGTTTGAGAGAATTTCTTGCAGAAATTTCAACTCTTGGAAGGTTAAAGCAAAGGAATTTAGTAGGGTTAAGAGGTTGGTGTAAGAAAAATGCTGGAAATTTCTTATTAGTTTATGATTATATGGAAAATGGAAGTTTAGACAAAAGGGTTTTTGATTGTGATGAGAGCAAGATGTTAAACTATGAAGATAGAATAAGGATTATTAAGGATGTTGCTTATGCTATCTTGTATTTGCATGAAGGGTGGGAAGTAAAAGTGGTGCATAGGGACATTAAGGCTAGCAATGTTTTACTTGATAAAGATATGAATGCAAAGTTAGGTGATTTTGGTTTAGCTAGAATGCAAAATCATGGTCAAATTGCTAGCACAACAAAGTTAGTTGGAACGGTCGGTTACATGGCTCCTGAAGTGATCAAAACCGGTAGAGCTTCGACTCAAACCGATGTTTACATGTTCGGTATCTTGATTTTAGAGGTTATGTGTGGAAGGAGACCATTAGAAGAAGGTAAGGAACCTTTGGTGGAGTTTGTTTGGAAACTTATGGTACAAGGGGAACTTGTTTGTGCACTTGATCAGAGGTTAAGGGCTAAAGGTGAATTTAGTTTGCAAGAAATGGAGAGAGTGTTACACTTAGGTTTGTTGTGTGCATATCCTGAACCAAAATCTAGGCCAACAATTAGACAAGTTTTGAATATTTTAGAAGGGAAGAATGAGGGAGTTGAAGAGTCAGAGATTGAGAATATGGATAGTTATTTGCTTAAACAGTTAAAATCAAGGGATATATTGGCTGAATATTCTCATTATTTTAGCTATGCATCACACCCAACTTTTCAAGATATTCGTCAATTATCACCAACATCTTTCACTTGGTCCGGATCTTTAGTTAAGGGGAGGTGA 2070 0.3454 MTRHKNSQHLLLHLLSTIFFLHFNSISTIDFIFNGFNSSNVLLFGNATIDSQILTLTHHQSFSIGRALYPQKIPTKNSSFVYPFSTSFIFSMAPFEDTLPGHGLVFIFTPVKGIQGTSSAQHLGLFNLTNNGNSNNHVFGVEFDVFMNQEFDDINNNHVGIDINSLKSYVSHDVGFWPDDGKSEKDKFFKKLKLNNGENYQVWIDYEDSLINVTLAKLGMKKPIRPLLNVSLNLSDVFEDEMFVGFTSSTGQLVESHKILAWSFSNTNFSLSDELITIGLPSFVLPKDSIFKSKGFVAGFSVLVFFIVCVLVLLVLFLIQKKRKREKKRSEMEDWELEYWPHRMSYEEIESSTKKFSEENVIGVGGNGKVYMGVLRGGVMIAVKNISHENDGLREFLAEISTLGRLKQRNLVGLRGWCKKNAGNFLLVYDYMENGSLDKRVFDCDESKMLNYEDRIRIIKDVAYAILYLHEGWEVKVVHRDIKASNVLLDKDMNAKLGDFGLARMQNHGQIASTTKLVGTVGYMAPEVIKTGRASTQTDVYMFGILILEVMCGRRPLEEGKEPLVEFVWKLMVQGELVCALDQRLRAKGEFSLQEMERVLHLGLLCAYPEPKSRPTIRQVLNILEGKNEGVEESEIENMDSYLLKQLKSRDILAEYSHYFSYASHPTFQDIRQLSPTSFTWSGSLVKGR* 690
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g2447 689 Gene3D - 27 274 - -
Tpr2g2447 689 Gene3D Transferase(Phosphotransferase) domain 1 432 649 - -
Tpr2g2447 689 ProSitePatterns Serine/Threonine protein kinases active-site signature. 477 489 IPR008271 GO:0004672|GO:0006468
Tpr2g2447 689 ProSiteProfiles Protein kinase domain profile. 356 631 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr2g2447 689 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE VII.1 9 673 - -
Tpr2g2447 689 Pfam Legume lectin domain 29 268 IPR001220 GO:0030246
Tpr2g2447 689 Pfam Protein kinase domain 357 622 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr2g2447 689 Gene3D Phosphorylase Kinase; domain 1 317 431 - -
Tpr2g2447 689 SMART serkin_6 356 623 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr2g2447 689 SUPERFAMILY Protein kinase-like (PK-like) 331 625 IPR011009 -
Tpr2g2447 689 SUPERFAMILY Concanavalin A-like lectins/glucanases 27 274 IPR013320 -
Tpr2g2447 689 CDD lectin_legume_LecRK_Arcelin_ConA 29 267 IPR001220 GO:0030246
Tpr2g2447 689 PANTHER - 9 673 - -
Tpr2g2447 689 Coils Coil 318 338 - -
Tpr2g2447 689 ProSitePatterns Protein kinases ATP-binding region signature. 362 384 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g2447 Tpr-Chr2 29478429 29481193 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g2447 24 572 Receptor kinase-like Gene Family AT4G04960 66.547 0.0 723
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Tpr2g2447 Pkinase 1.9e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g2447 - - gmx:100804391 1117.45