Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g2411 ATGAATTATAATATGACATGTTTCTATACTTTTGTTTTATTAGTACTATTTTTATCATCATTGAATCTTGTTTTTTCTTCTAAACATAGAAAATTGAGCTATGTTGGTGATAATGGTGATCTTGTGACTAATTTACCTGGTCAGCCTCCAGTAGATTTCCAGCACTATGCTGGATATGTCACAGTTAATGAAACCAATGGAAGAGCACTGTTTTACTGGTTTTTTGAAGCCATGACCAAACCTGAAGAGAAACCATTGGTTTTATGGCTTAATGGAGGTCCTGGTTGCTCTTCTGTGGGATATGGAGCAACACAAGAAATTGGCCCATTTTTAGTGGACACTGATGGCAAAGGCATTAAATTTAATAACTTCTCATGGAACAAAGAAGCAAACATGTTATTCTTGGAATCTCCTATTGGAGTTGGCTTTTCCTACTCAAATACAACTAGTGAATATGCACAATTAGGAGATGACTTCACAGCTAATGATGCTTACACTTTTCTACATAATTGGTTTATCAAGTATCCATCATATAGAACAAGGGAATTTTACATAGCAGGAGAGAGCTATGCAGGAAAATATGTACCAGAGCTAGCTGAACTCATCATTGATAGAAACAATAACCCTTCCCTTCATATTGATCTCAAGGGCATTTTGCTAGGAAACCCTGAAACTTCTTATGCTGAGGATTGGTTAGGAATGGTTGATTATGCTTGGAGTCATGCAGTGATATCCGACGAAACATACAAAAAAATCAGAAGAAGCTGTGAATTTAACAGTAGTGATCCATGGAAAAATAAAGAATGTACTCAAGGAGTGGATGAAGTGCTCAAACAATACAATGAAATTGATATCTATAGTCTTTATACCTCTGTCTGCTTTGCCAGTACAGCACGATCAAATGATCAATCGATGAAAATGACGATGAAGCACTCATCTTTAATGATACCAAGGATCATGGGTGGTTATGATCCATGTCTTGATGATTATGCTAAAGCTTTTTACAATAAACCAGATGTTCAGAAGGCCCTTCATGCCAGTGATGGTCACAATCTTAGGAATTGGAGTATTTGCAACAATGACATATTCACCGGATGGAAACAATCAAAACCTTCTGTTATCCCAATTTACAAGAAGCTTATTTCAGTTGGACTTAGAATTTGGCTTTACAGTGGAGACACTGATGGTAGAGTGCCAGTGCTATCAACTAGATACAGCTTAAGCATTCTTGATTTGCCTATCACCAAACAATGGAGTCCTTGGTACCATGAAAAGGAGGTAAGTGGATGGTATCAAGAATATGAAGGACTTACATTTGCTACATTTAGAGGAGCTGGTCATGCTGTGCCCTGTTTTAAACCTAGCAATTCACTTGCATTCTTCACTTCCTTTCTTCTCGGAGAATCACCACCTTCTACTAGATGA 1425 0.3726 MNYNMTCFYTFVLLVLFLSSLNLVFSSKHRKLSYVGDNGDLVTNLPGQPPVDFQHYAGYVTVNETNGRALFYWFFEAMTKPEEKPLVLWLNGGPGCSSVGYGATQEIGPFLVDTDGKGIKFNNFSWNKEANMLFLESPIGVGFSYSNTTSEYAQLGDDFTANDAYTFLHNWFIKYPSYRTREFYIAGESYAGKYVPELAELIIDRNNNPSLHIDLKGILLGNPETSYAEDWLGMVDYAWSHAVISDETYKKIRRSCEFNSSDPWKNKECTQGVDEVLKQYNEIDIYSLYTSVCFASTARSNDQSMKMTMKHSSLMIPRIMGGYDPCLDDYAKAFYNKPDVQKALHASDGHNLRNWSICNNDIFTGWKQSKPSVIPIYKKLISVGLRIWLYSGDTDGRVPVLSTRYSLSILDLPITKQWSPWYHEKEVSGWYQEYEGLTFATFRGAGHAVPCFKPSNSLAFFTSFLLGESPPSTR* 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g2411 474 Gene3D - 373 467 - -
Tpr2g2411 474 PANTHER CARBOXYPEPTIDASE 9 471 - -
Tpr2g2411 474 SUPERFAMILY alpha/beta-Hydrolases 38 468 IPR029058 -
Tpr2g2411 474 PRINTS Carboxypeptidase C serine protease (S10) family signature 122 134 IPR001563 GO:0004185|GO:0006508
Tpr2g2411 474 PRINTS Carboxypeptidase C serine protease (S10) family signature 135 145 IPR001563 GO:0004185|GO:0006508
Tpr2g2411 474 PRINTS Carboxypeptidase C serine protease (S10) family signature 171 196 IPR001563 GO:0004185|GO:0006508
Tpr2g2411 474 PRINTS Carboxypeptidase C serine protease (S10) family signature 437 450 IPR001563 GO:0004185|GO:0006508
Tpr2g2411 474 Pfam Serine carboxypeptidase 46 465 IPR001563 GO:0004185|GO:0006508
Tpr2g2411 474 ProSitePatterns Serine carboxypeptidases, serine active site. 185 192 IPR018202 GO:0004185
Tpr2g2411 474 Gene3D - 326 364 - -
Tpr2g2411 474 Gene3D alpha/beta hydrolase 37 295 IPR029058 -
Tpr2g2411 474 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 9 471 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g2411 Tpr-Chr2 29058270 29062060 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g2411 331 468 Calmodulin-binding Proteins AT2G22960 31.655 4.63e-14 68.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g2411 K16297 - gmx:100819700 848.966
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g1863 3 16823444 16829000 Tpr2g2411 2 29058270 29062060 PCT