LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Tpr2g2404	ATGGAACACACCGACGAATCTGTTGACGTTGAGTCCAGAGACCTTCATTCCACTAAAGGTACTGATACGTATGATTTAGAATCGAATGCCGACGAGGATGACAGTTATTCAGGATCCAGTGGGGATGAAAGGTCAGAGACTGAAAGTTCAGAGACTGGCGAAGATGCATCTGATAATATTGGAGCTGCAGTTCATAGTGAGGTAAATTTTGATTCAATTACTTCTGATGAGATTCGAGCCATGGAATTTGCTACTGTTAGTGAAGCTTATGAATTTTATTACCGGTATGGTAAATGTAAGGGTTTTGCTATTAGGAAAGCTTCTAGTAGGATAAAAGAGTTAGATGGTAATAAAGTAACACAAATGAAGCAGTTTGTTTGCAACAGACATGGTTTAAGAGAGAAGAAACATTTAACCAGGTTAGATAGGAAAGTAGAACATAGACGTTTGAGCCGTACAAATTGTGAAGCTAGGTTTCGTGTGCAATACAGAAAACAAAAGGATAGATATGTAGTTACTGCTTTCGTAGAGTGTCATAACCATGAATTAACCCCAGCTCGGTTTGTTCACCTGCACCCTGTTTATCGTAAAATATCTGAAGCAGATAAGGCTCAGATTGATGGTCTTCAAACACGTGGAATTAGAACTTGTCATATAATGGGATACATGATTGCCCAGAAGGGTGGATATGCTAGTGTTGGATTTACAAAGAAAGATTTGTACAATTATTTTGATAAAAAAATGCGTGAGTGTATTAAAGATGGTGATGTTGTCGCTTCTTTAAATTATCTTAATGTAAAGTCGTCTACTGATCCCATGCTATATGCTGAGTATGCCGTCGACAATAGTAATGGACGAATGAGGTCTCTATTTTGGGCTGATGGCAGTAGCAGATCAGACTACTTTTGTTTTGGTGATGTGCTTGCCTTTGACACGACTTACCGGAAGAATAAATACAACTATCCATTGGTTGTATTTTCAGGGTGTAACCACCATTCTCAGACAGTAATTTTTGGTGCTGCATTGGTAGCAGATGAAACGACGGAGACGTACAAGTGGGTGTTGAATTGTTTTTTAGAGTGCATGGAAGGTAAACAACCAAAAGCAGTGGTAACAGATGGAGATGGGGCAATGAGGGAGGCCATAAAACAGATTTTTCCCGATGCCACCCACAGGTTATGTGCTTGGCATTTGAATAAGAATGCAGTTGAGAATGTGAAAGATAATCCAGAATTTTTGGACGGTTTTCAAAAAGCCATGTACTCTGTAACACCCAAACCCGTTATTTAA	1290	0.3915	MEHTDESVDVESRDLHSTKGTDTYDLESNADEDDSYSGSSGDERSETESSETGEDASDNIGAAVHSEVNFDSITSDEIRAMEFATVSEAYEFYYRYGKCKGFAIRKASSRIKELDGNKVTQMKQFVCNRHGLREKKHLTRLDRKVEHRRLSRTNCEARFRVQYRKQKDRYVVTAFVECHNHELTPARFVHLHPVYRKISEADKAQIDGLQTRGIRTCHIMGYMIAQKGGYASVGFTKKDLYNYFDKKMRECIKDGDVVASLNYLNVKSSTDPMLYAEYAVDNSNGRMRSLFWADGSSRSDYFCFGDVLAFDTTYRKNKYNYPLVVFSGCNHHSQTVIFGAALVADETTETYKWVLNCFLECMEGKQPKAVVTDGDGAMREAIKQIFPDATHRLCAWHLNKNAVENVKDNPEFLDGFQKAMYSVTPKPVI*	430

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Tpr2g2404	429	Pfam	MULE transposase domain	307	401	IPR018289	-
	Tpr2g2404	429	MobiDBLite	consensus disorder prediction	1	62	-	-
	Tpr2g2404	429	MobiDBLite	consensus disorder prediction	37	51	-	-
	Tpr2g2404	429	Pfam	FAR1 DNA-binding domain	91	184	IPR004330	-
	Tpr2g2404	429	PANTHER	OS02G0262500 PROTEIN	77	422	-	-
	Tpr2g2404	429	PANTHER	PROTEIN FAR1-RELATED SEQUENCE 10-RELATED	77	422	IPR031052	GO:0006355
	Tpr2g2404	429	MobiDBLite	consensus disorder prediction	1	21	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Tpr2g2404	Tpr-Chr2	28967879	28973745	Transposed

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	FAR1	Tpr2g2404		MULE	3e-30	CL0219

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Tpr2g2404	-		-	ccaj:109792835	484.952