Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g2403 ATGGGGTTTTTGAATTTGGAGTTGCATGTGCAAATCTTTGTCACTACTATGATGGTGATTCTACTGGGAACTTTCTGTGTTGCAGACACTGACCCTGTTGATGTTGCTGCAATCAATAGTCTATATGTTGCTATGCACTCACCACCTCTTCAAGGGTGGAAGCCTGTGGGAGGGGATCCATGTTTCGACCATTGGCAAGGTGTGGATTGTGTCTTCTCCAACATAACTGCGATACGACTAGCAGGCTTGAATTTGGGTGGAGAGCTTGGCAGTAATTTGGATTTCCCGTCCATTATAGACATTGATCTTAGCAACAACCACATTGGAGGTGCCATTCCATTCACTTTACCGCCTACTTTGAGGACCTTGTCTCTGTCAGGAAATCGGTTAAATGGAAGCATTCCAGATGCGTTATCCTTATTAACTCAATTGTCAAACTTGGATTTGGCCAATAACAACTTGACCGGTCAGCTGCCTTCTTCAATGGGGAGTTTATCATCTCTTACAACATTACTGTTGCAGAACAATCGACTTGTAGGGACCCTTTTTGTTTTGCAGGACCTTCCTCTTCAGGATTTGGATATAGAGAATAATTTATTCTCTGGCCCAATTCCTCCAAATTTGTTGAGCATCGCTAATTTCAGAAAAGATGGGAATCCATTTAATACTACTATTATTCCATCTCCGCCTGTTGCTGCAGCCCCTTTGCCTCTACCTATCGGGCGATCCCCTGAAGAATCACCTTGGCATGTGGCATATAGTCCTTCTGACTTCACAGCACCGATGCCCGGAAATGTTAAGAAGTCTTTCCTAGCTAAGCATGCCATTTGGATTGCCAGTGCCGGTGTATTAATATTTATCGTTCTGGGAATTTGTATTTTTATGGTGTGTTGCTGTAAGAAAGAGTCAAAAAATAAAAATTCTCAGAACCTTGATGTGGAGGGTTTTCCACAAACTTTGCATAAACCTACTCGCAACAACACTGTTTATGAAGCAACTAATCAAGATGGAAAAGCTGAGAAAGCACCGCGTGTAAATGAAGTTCCAAATAGAAGAACAAATTTGATTCCAAAGGCTCAGGATGAACAAGAAGTATATGTCAACAGACTCAACACAATATCTTCAACATCAGAATACAATAATGGTTCACATCATCCACTCCTGCAGCCGCCACCACATTCTTTGCCAATCATTCCTGGTGAGAAAGTCATCGTCAATCCAATTGCAACTACAACAACCGAAAGACAAGCTATGACTAGTTCAGTCAAAATGTATACTGTTGCATCACTTCAGCAATATACAAATAGCTTTTCCCAAGAAAATCTTATTGGTGAAGGCACTCTTGGATCTGTGTATAGAGCGGAGCTCCCTGATGGAAAGCTGCTGGCAGTGAAGAAACTGGATGCTACCACTTTCAAGGACCAGAATGATGAACAGTTTCTTCAATTGGTATCCAGCATCTCAAAAATTCAGCATGCCAATATCGCAAAGCTTGTGGGCTACTGTGCTGAGTATAACCAACGATTGCTTATATACGAGTATTGTAATAATGGAACCCTATATGAAGCACTTCATGGTGATGACGAACATTGTATTAAATTTCCATGGAATGCACGCATTAAGGTCGCACTTGGAGCTGCAAGGGCTTTAGAGTATCTGCATGAAAACTTTCGGCCGCCTATTGTTCACCGAAATTTTAGATCTGCTAATGTTCTCCTGAATGAAAAGTCGGAAGTGCGTGTCTCTGATTGTGGATTAGGTCACTTGCTATCTTCTGGCACTGTTGGTCAGTTATCTGGACACCTCCTTACAGCTCATGGTTACAGTGCTCCAGAATTTGAGTTGGGAAGTTATACACAGCAAAGTGATGTCTTCAGTTTCGGAGTCGTAATGCTAGAACTCCTCACTGGAAGAAAATCCTATGACAGGTCACGGCCTCGTGGAGAGCAATTTTTGGTCAGATGGGCAATTCCTCAACTTCATGATATTGATGCATTGTCAAAAATGGTTGATCCTCGCTTAAATGGATCATATTCTATGAAGTCGTTGTCACGCTTTGCAGATATTGTTTCTTCATGTATTCAGCGTGAACCCGAATTCCGGCCAGCTATGTCTGAAATAGTTCAAGATCTCTTGCTAACAATGTAG 2148 0.4195 MGFLNLELHVQIFVTTMMVILLGTFCVADTDPVDVAAINSLYVAMHSPPLQGWKPVGGDPCFDHWQGVDCVFSNITAIRLAGLNLGGELGSNLDFPSIIDIDLSNNHIGGAIPFTLPPTLRTLSLSGNRLNGSIPDALSLLTQLSNLDLANNNLTGQLPSSMGSLSSLTTLLLQNNRLVGTLFVLQDLPLQDLDIENNLFSGPIPPNLLSIANFRKDGNPFNTTIIPSPPVAAAPLPLPIGRSPEESPWHVAYSPSDFTAPMPGNVKKSFLAKHAIWIASAGVLIFIVLGICIFMVCCCKKESKNKNSQNLDVEGFPQTLHKPTRNNTVYEATNQDGKAEKAPRVNEVPNRRTNLIPKAQDEQEVYVNRLNTISSTSEYNNGSHHPLLQPPPHSLPIIPGEKVIVNPIATTTTERQAMTSSVKMYTVASLQQYTNSFSQENLIGEGTLGSVYRAELPDGKLLAVKKLDATTFKDQNDEQFLQLVSSISKIQHANIAKLVGYCAEYNQRLLIYEYCNNGTLYEALHGDDEHCIKFPWNARIKVALGAARALEYLHENFRPPIVHRNFRSANVLLNEKSEVRVSDCGLGHLLSSGTVGQLSGHLLTAHGYSAPEFELGSYTQQSDVFSFGVVMLELLTGRKSYDRSRPRGEQFLVRWAIPQLHDIDALSKMVDPRLNGSYSMKSLSRFADIVSSCIQREPEFRPAMSEIVQDLLLTM* 716
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g2403 715 Gene3D Transferase(Phosphotransferase) domain 1 515 713 - -
Tpr2g2403 715 Pfam Protein tyrosine and serine/threonine kinase 440 711 IPR001245 GO:0004672|GO:0006468
Tpr2g2403 715 Gene3D Phosphorylase Kinase; domain 1 402 514 - -
Tpr2g2403 715 PANTHER LEUCINE RICH REPEAT KINASE 2 9 156 - -
Tpr2g2403 715 PANTHER LEUCINE RICH REPEAT KINASE 2 141 712 - -
Tpr2g2403 715 PANTHER PROTEIN STRUBBELIG-RECEPTOR FAMILY 3-LIKE ISOFORM X1 9 156 - -
Tpr2g2403 715 PANTHER PROTEIN STRUBBELIG-RECEPTOR FAMILY 3-LIKE ISOFORM X1 141 712 - -
Tpr2g2403 715 ProSiteProfiles Protein kinase domain profile. 437 713 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr2g2403 715 ProSiteProfiles Leucine-rich repeat profile. 119 141 IPR001611 GO:0005515
Tpr2g2403 715 SUPERFAMILY L domain-like 32 213 - -
Tpr2g2403 715 Pfam Leucine rich repeat 118 178 IPR001611 GO:0005515
Tpr2g2403 715 SUPERFAMILY Protein kinase-like (PK-like) 417 712 IPR011009 -
Tpr2g2403 715 Gene3D Ribonuclease Inhibitor 35 230 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g2403 Tpr-Chr2 28938271 28944960 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g2403 20 712 Strubbelig Receptor Gene Family AT4G03390 50.601 0.0 640
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Tpr2g2403 PK_Tyr_Ser-Thr 7e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g2403 - - gmx:100793423 969.148