Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g2401 ATGGGGACGGAGGTGATGGGTAGATGGGGGACATGGGAGGAGCTCCTCCTTGGTGGGGCGGTTCTCCGCCACGGGAGTCGTGACTGGAACGTTGTTGCCGCTGAGCTTCGAGCACGAACCGTTTATCCTTACATTTTTACCCCTGAGGTCTGTAAAGCCAAGTATGAAGACTTGCAACAACGGTATTCTGGGAGCACGGCTTGGTTTGAGGAGCTTAAGAAAACAAGAGTGGCAGAGCTGAAGAAAGCTTTGGAACGATCTGAAGATTCTATTGGGTCTCTTGAATCGAAGCTTGAAGTCCTGAAGGCTGAGAAGAATGAGAAAAACGATAATTGTGAAAATGGACTAGAAAGTCCGGTATCACATGTACCTTCCAAGAAATTGAAGATATTGGAGAGAGTTGAATCTTCCATTAAAGAGACATCAAAGGACGGGCTATCTGCCGGGAGTTTCACACATGAAACGAGGACAAACTGGTCTCCTGAATCTCAGGTTCCAACTAGGTCTGCCGATGATAATGAGACTAAGCCGGAAGTTTCACAATCTACTGAGCAGGCTAAAATTTCGAACGTAGATAATTTGGCACTTGCTTTATATGAAGGACAATTAGGATGTTGTAAAAAACGGAGAGGGAAGAGAAAAAGGAAGGATTGTAGCAGAAATATTAAGGAAGCAGTTAGTGTAGGAGAAAGTGACTTATTAGATTCAGCTGATGTTGTTTCTTGGTGTAAAGAAAGTTCTACCAGTAACTGTGGTGAAGTTGCCAAATCTTCTGTTGATGTAGATAATCAGAAAACTAAGATTTCGAAAAAGCATGGCGCAGAAGATATGGTTAAGATTTTAGATTCTATTTTTGAAACTCAAGGTGCATCTGCCTTCCGTCGAAGACTTGATAGTCAGAAAAGAGGAAGGTACAAGAAAATGATCCGGCGGCACATGGACTTTGACACTATAAGGTCAAGAATTAGCAACCAAACAATTAAATCAACCGTAGAACTATTCCGAGATTTGTTGCTACTCACCAACAATGCCTTAGTCTTCTACTCGAAGAACACTCGCGAGTATAAAACTGCTCTCCTTCTAAGAGAAATAGTCACCAAAAAAATGAGGGAGAGTTTCAAGGATAGTAATAGTATTGTTAGTAGCAGCAAAGTTAGCAAAATCGCTGAACCTAACGAGTCTATGAAATTACCGGTGCATAATCTTCATGTGAAACCAAGAAGTGTTAGACCAGGTAACAGAAAAATCATTGCAAAGGCTGGTGGTGGCAACAACTCTGCATCCGGGACATCACAAGGAGCTAAGAAGCCGATTAAAGCTGATTCTTCGCCTTCCGTGGAATCCTTAAATGTCATGAAAAAAACTTTTGGTAGACCGAAAAGAGTTGAACGTGTGACTTCAGATCAGAAGACTACAACAACGCCAACGAAAGGAAAGAAAAGAGTTAGAACAAAGTCATAG 1461 0.4196 MGTEVMGRWGTWEELLLGGAVLRHGSRDWNVVAAELRARTVYPYIFTPEVCKAKYEDLQQRYSGSTAWFEELKKTRVAELKKALERSEDSIGSLESKLEVLKAEKNEKNDNCENGLESPVSHVPSKKLKILERVESSIKETSKDGLSAGSFTHETRTNWSPESQVPTRSADDNETKPEVSQSTEQAKISNVDNLALALYEGQLGCCKKRRGKRKRKDCSRNIKEAVSVGESDLLDSADVVSWCKESSTSNCGEVAKSSVDVDNQKTKISKKHGAEDMVKILDSIFETQGASAFRRRLDSQKRGRYKKMIRRHMDFDTIRSRISNQTIKSTVELFRDLLLLTNNALVFYSKNTREYKTALLLREIVTKKMRESFKDSNSIVSSSKVSKIAEPNESMKLPVHNLHVKPRSVRPGNRKIIAKAGGGNNSASGTSQGAKKPIKADSSPSVESLNVMKKTFGRPKRVERVTSDQKTTTTPTKGKKRVRTKS* 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g2401 486 PANTHER BROMODOMAIN-CONTAINING PROTEIN 8 1 485 - -
Tpr2g2401 486 Gene3D - 262 382 IPR036427 GO:0005515
Tpr2g2401 486 MobiDBLite consensus disorder prediction 141 168 - -
Tpr2g2401 486 Pfam Bromodomain 278 358 IPR001487 GO:0005515
Tpr2g2401 486 ProSiteProfiles Bromodomain profile. 285 355 IPR001487 GO:0005515
Tpr2g2401 486 MobiDBLite consensus disorder prediction 423 450 - -
Tpr2g2401 486 PANTHER BROMODOMAIN PROTEIN 1 485 - -
Tpr2g2401 486 SUPERFAMILY Bromodomain 272 376 IPR036427 GO:0005515
Tpr2g2401 486 MobiDBLite consensus disorder prediction 141 186 - -
Tpr2g2401 486 MobiDBLite consensus disorder prediction 419 486 - -
Tpr2g2401 486 Coils Coil 77 111 - -
Tpr2g2401 486 SMART bromo_6 270 374 IPR001487 GO:0005515
Tpr2g2401 486 CDD Bromodomain 275 369 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g2401 Tpr-Chr2 28900380 28906937 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Tpr2g2401 Bromodomain 1.2e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g2401 - - gmx:100793951 662.914
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g1857 3 16749671 16754792 Tpr2g2401 2 28900380 28906937 PCT