Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g2374 ATGTCGAGTTTCGCTTGCCAACGTCTTTCTAGAACTTTCCGTGACAATCGTAGAACCGCTACGATTGTTCTCCTCTGCACCGCCGTTAGTGGTGGCGGTTATTTTGCTTATGGTCAGTTAGCACCACCGGAAGTTGTTACCGATAGGAAAAAAGTGGTGGTGTTGGGAACTGGATGGGCGGCAACAAGTTTTATGAAGAATCTGAATAGTCCGAAGTATGAAGTTCAGGTGGTTTCGCCTAGGAATTATTTTGCATTCACTCCTTTGTTGCCTAGTGTGACTTGTGGTACAGTTGAAGCGCGCAGTATTGTTGAACCTGTTCGCAATATTTTTAGGAAGAAAAAGGTCGATGTACAATTCAGTGAAGCAGAATGTTTCAAGATTGATGCTGAAAATAAGAAAGTTTATTGTCAATCTAATGCAAACAATAGTTTGGATGGGAAAGAAGAATTTGTTGTGGACTATGATTACCTAATCATCGGAGTGGGCGCTCAAGTCAACACATTTAACACACCCGGAGTGGTAGAGAATTGTCATTTTTTGAAGGAAGTTGAAGATGCCCAGAAGATTAGAAGAACAGTTATTGACTGCTTTGAGAGAGCAAATTTGCCCGAAGTTAGCGAGGAAGAAAAGAAGAGAATTCTTCATTTTGCTATTGTTGGAGGCGGGCCAACTGGAGTAGAGTTTGCAGCCTCACTTCATGACTTTGTCAATGAGGATTTAGTCCATTTATATCCTGGGATAAAAGATTTAGTAAAAATTACACTTCTAGAAGCCGGAAATCATCTTTTGAGCATGTTTGACAAAAGGATCACTGCTTTTGCTGAAGATAAGTTTCAAAGAGATGGGATTGATGTGAAAACTGGATCCATGGTTGTGAAGGTAGATGAGAAAGAAATCTCTACTAAAGAGCTGAATAATGGAGGAAAGATTACTTCAATTCCATATGGAATGGCTGTCTGGTCAACTGGTATTGGCACTCGTCCATTTATTAAAGATTTCATGTCACAAATTGGTCAGGCTAGCAGACGTGCCCTAGCTACTGATGAATGGTTGAGAGTCGAAGGATGCAACAATGTATATGCACTCGGTGATTGTGCGACGATAAATCAGCGAAAAGTCATGGAAGATATTGGGGCTATCTTTAAGAAGGCCGAAAAAGGCAATTCAGGAACACTTACAGTCAAAGAATTTCAAGCAGTCATGAATGACATTTGTGAACGATACCCTCAGGTTGAGCTGTATCTTAAAAATAAACAGATGCGCAACATTGCTGATTTATTGAAGGAAGCTAAGGGAGATGTCCAGAAAGAATCAATTGAACTAAATATCGAAGAACTCAAAACAGCACTTTCCAATGTGGATTCTCAGATGAAATTTCTCCCTGCTACAGCGCAGGTTGCATCTCAGCAAGGAACTTACCTAGCCAAATGTTTTAACCGGATGGAAAACTGTGAAGCAAATCCAGAGGGTCCTCTCAGGTTCAGGGGAGAAGGTCGCCATCGCTTCAAACCCTTCAGGTACAAGCACTTAGGTCAATTCGCTCCTTTGGGAGGAGAGCAGACAGCTGCCCAGCTTCCTGGGGATTGGGTTTCAATTGGTCACAGCAGCCAATGGTTGTGGTATTCTGTCTATGCAAGCAAGCAAGTTAGCTGGCGTACAAGGGCATTAGTAGTCTCAGACTGGGCCAGGCGTTTTATTTTTGGCAGGGACTCAAGTCGCATCTGA 1728 0.4225 MSSFACQRLSRTFRDNRRTATIVLLCTAVSGGGYFAYGQLAPPEVVTDRKKVVVLGTGWAATSFMKNLNSPKYEVQVVSPRNYFAFTPLLPSVTCGTVEARSIVEPVRNIFRKKKVDVQFSEAECFKIDAENKKVYCQSNANNSLDGKEEFVVDYDYLIIGVGAQVNTFNTPGVVENCHFLKEVEDAQKIRRTVIDCFERANLPEVSEEEKKRILHFAIVGGGPTGVEFAASLHDFVNEDLVHLYPGIKDLVKITLLEAGNHLLSMFDKRITAFAEDKFQRDGIDVKTGSMVVKVDEKEISTKELNNGGKITSIPYGMAVWSTGIGTRPFIKDFMSQIGQASRRALATDEWLRVEGCNNVYALGDCATINQRKVMEDIGAIFKKAEKGNSGTLTVKEFQAVMNDICERYPQVELYLKNKQMRNIADLLKEAKGDVQKESIELNIEELKTALSNVDSQMKFLPATAQVASQQGTYLAKCFNRMENCEANPEGPLRFRGEGRHRFKPFRYKHLGQFAPLGGEQTAAQLPGDWVSIGHSSQWLWYSVYASKQVSWRTRALVVSDWARRFIFGRDSSRI* 576
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g2374 575 Coils Coil 437 457 - -
Tpr2g2374 575 PANTHER NADH DEHYDROGENASE 6 575 IPR045024 GO:0003954|GO:0006116
Tpr2g2374 575 Gene3D - 43 389 - -
Tpr2g2374 575 Gene3D - 417 574 - -
Tpr2g2374 575 PANTHER NAD(P)H DEHYDROGENASE B2 6 575 - -
Tpr2g2374 575 SUPERFAMILY FAD/NAD(P)-binding domain 216 370 IPR036188 -
Tpr2g2374 575 SUPERFAMILY EF-hand 366 462 IPR011992 -
Tpr2g2374 575 ProSiteProfiles EF-hand calcium-binding domain profile. 373 408 IPR002048 GO:0005509
Tpr2g2374 575 SUPERFAMILY FAD/NAD(P)-binding domain 50 268 IPR036188 -
Tpr2g2374 575 Pfam Pyridine nucleotide-disulphide oxidoreductase 50 375 IPR023753 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g2374 Tpr-Chr2 28596956 28603317 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g2374 1 575 Chloroplast and Mitochondria Gene Families AT4G21490 72.041 0.0 853
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g2374 K03885 - gmx:100797657 1029.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g1828 3 16427012 16431878 Tpr2g2374 2 28596956 28603317 PCT