Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g2371 ATGGGAAGAACACCTTGTTGTGAGAAGAATAATGGTCTTAAAAAAGGACCTTGGACAACTGAGGAGGATCAAAAACTCATTGATTACATTCAAAAACATGGTTATGGCAATTGGAGGACACTCCCAAAGAATGCTGGTTTGCAAAGATGTGGTAAAAGTTGTCGTCTACGTTGGACAAACTATCTCCGACCAGACATAAAACGAGGTCGATTTTCATTTGAAGAGGAAGAGACTATAATTCAACTACATAGCATTCTTGGCAACAAGTGGTCAGCGATTGCATCTCGATTACCAGGAAGGACGGACAACGAAATAAAGAACTACTGGAACACACACATTAGAAAAAGGCTTTTGAGAATGGGAATTGATCCGGTAACACATAGTCCTAGACTTGACTTATTGGACCTCTCTTCTTTTCTATGTTCATCTCAAATGAACAATTTCCAAAATCTCCTTAACATGCAACAACCTTTGGTCATGAATCCTGAGCTTCTAAAGTTACTCTTCGCAACCTCATCACATCAACAAGATTATAGTAATAATCAAAACCAACCCTTCAATCCTCCAATACAAAATCAAATTCCACTTTCAAATTTTGGTCAATTCCAAGACCAAGTTCAACAAGTACCTAATTTTAATGCCAATGTTTGTACTACCACATTCACCACCCCTTGTGTTTCATCTTCATTACCTAATGAATCACATTTATTTGAACCCAAAGTTGAACCATATACATCAAATTTCAATGACCTTAGTAATTACCAACAATATTTTGGTCATGATATTGAAAATTGGCATGAAAATGGATTTGGTTTAAGTACCTTAAAAGAGGATTATGTACCTCAATTATCAAGCCATAATTATTATTATGGTTCAGATAATCAAAATCTCATGTATCGAAATTCAAACCAAATTTTATCAACACCATCATCTAGTACTACTCCAACACCTTTGAATTCAAATTCCACGTGTATCCTTGGGAGCAATACAGAAGATGAGAGAGAAAGTTATGAAAGTTGTAATAGGTTGAATTTTGAAATCCCTGCACACATTTTAGAGGCCAATGATTTCATGTAA 1077 0.3547 MGRTPCCEKNNGLKKGPWTTEEDQKLIDYIQKHGYGNWRTLPKNAGLQRCGKSCRLRWTNYLRPDIKRGRFSFEEEETIIQLHSILGNKWSAIASRLPGRTDNEIKNYWNTHIRKRLLRMGIDPVTHSPRLDLLDLSSFLCSSQMNNFQNLLNMQQPLVMNPELLKLLFATSSHQQDYSNNQNQPFNPPIQNQIPLSNFGQFQDQVQQVPNFNANVCTTTFTTPCVSSSLPNESHLFEPKVEPYTSNFNDLSNYQQYFGHDIENWHENGFGLSTLKEDYVPQLSSHNYYYGSDNQNLMYRNSNQILSTPSSSTTPTPLNSNSTCILGSNTEDERESYESCNRLNFEIPAHILEANDFM* 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g2371 358 Pfam Myb-like DNA-binding domain 15 62 IPR001005 -
Tpr2g2371 358 Pfam Myb-like DNA-binding domain 68 112 IPR001005 -
Tpr2g2371 358 SMART sant 14 64 IPR001005 -
Tpr2g2371 358 SMART sant 67 115 IPR001005 -
Tpr2g2371 358 SUPERFAMILY Homeodomain-like 12 109 IPR009057 -
Tpr2g2371 358 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 63 117 IPR017930 -
Tpr2g2371 358 ProSiteProfiles Myb-like domain profile. 10 62 IPR001005 -
Tpr2g2371 358 Gene3D - 14 67 - -
Tpr2g2371 358 Gene3D - 70 117 - -
Tpr2g2371 358 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 351 - -
Tpr2g2371 358 PANTHER TRANSCRIPTION FACTOR MYB41 1 351 - -
Tpr2g2371 358 ProSiteProfiles Myb-like domain profile. 63 113 IPR001005 -
Tpr2g2371 358 CDD SANT 70 113 IPR001005 -
Tpr2g2371 358 CDD SANT 17 62 IPR001005 -
Tpr2g2371 358 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 10 62 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g2371 Tpr-Chr2 28572814 28574576 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g2371 1 358 MYB Transcription Factor Family AT4G21440 51.832 3.12e-105 311
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Tpr2g2371 Myb_DNA-binding 6.2e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g2371 K09422 - gmx:778071 417.927
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g1822 3 16326971 16328599 Tpr2g2371 2 28572814 28574576 PCT