Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g2369 ATGGGGAAAAAATCAACGACGGATGAAGTCAAACTGGAAATTCCGCCGGATAATCTCCGGTGCAGCCGCACCGACGGACGGCAATGGCGGTGCAAAAGAAGAGCGATGGAAAACGTGAAATTATGCGAGGCTCATTATCTTCAAGGAAAAATTCGGCAGAACAAAGAGAAGGTTCCAGAATCACTGAAACTTCAAGGAAACATGAAGATGAAGAAGAAGAAGAGGAAGATAAACGACGTCGTTGAAATTAGGTCAAAGAAGAAAAAGAAGAAGAATGGTGATGTGCAATTGGAACTGATAAGGATGGTGTTACAGAGAGAGGTTGATAAGAAGAAGAAGGTGAAGAACAACAACAACAACAACAACAACAACAACAGAAAAGATGAAGAATTTGAATTGCAGCATTACAGTGAAGGAGAATTGAGAAAAGAATTACCTAATGGGGTTATGGAAATTGCTCCTGCTTCAACATCTTGTGATGTTGATTTTCACTGTAATGGTAAATCAATTGTTACACCACGTTACTTCAGGTCCAAGAATGTTGATAGAAGGGTCAATTTTGATCATTTGCAGGTTTTGAAGAAGGGGAAGAGGAAGAAGTGTCATTGGTGTCAGAGTAGTGATTCTTTGAATCTGATTAAGTGTTCTAATTGCCAGCAAGTGTTTTTCTGCATGGATTGCATTAAACAACGGTATTTCGAAACTCAAAATGAGGTTAAGATGGCGTGTCCAGTTTGTCGAGGAACTTGCACATGTAAAGATTGCCGTGCGAGTCAGTGTAAGGACCGTGAAAGTAAGGATTATTTGTCTGGTACATGTAGAGTTGATAGGATATTGCATTTTCATTATTTGGTCTGTTTGGTTCTTCCTGTACTGAAACAAATAAGCGAAGACCAGCATATAGAGCTAGAAACAGAAGCAAAAAATACAGGAAAAAATATTTCTGATATTCTCATCAAGCAAGTCGAATTTGGATGCAATGGGAAAAATTGCTGCAACTACTGCAAAACACCCATTCTGAATCTTCGCAGAAGCTGCTTTAGTTGTTCCTACAGTCTTTGCTTAAGATGTTGTCAGACATTAAGTCAAGGAAGCCCCTTTGAGCATATAAATTCTTCAGCGTCCAACTTACCTGACAAAATGGACGATTGCATTGCTGATGAAAGTTGCCTTTCGGATGATAAGACCATTTCTAGCGACAATGTAACTGATACTTCAATATTACCGGATTGGGCTGGTTGTATTGGTACTTCTGACAGTGTATCATGCCCTCCAACAGAGCTAGGTGGTTGCGGTAATAGCCACCTTGACTTGAGATGTGTTTTTCCCTTAAGCTGGATCGAAGAATTGGAAGCTAAGGCGGAAGAAATAGTTTGCAGCTATGACGTTCCTGAAATGTTGGATAAAAATTCTAGTTGCTCACTTTGCATTGACAAAGATCATAAAACTAACAGATATAAGCATTCGAAAGAAGCTGCTCGAAGAGAAGATTCTGATGACAATTCCTTATTTTATCCTACAGTTTTCGACATCAATTCTGATCATTTCGAACACTTTCAGAAACACTGGGGAAAAGGCCATCCTGTACTAGTGCGAGACGTGCTCCGAAGTACAAAAACCATCAGTTGGGATCCTCTGGCCATGTTCTGTGCTTATCTCGAGAGGAGCATTACAAGATATGAGAATAATAAGGACTTGCTTGAAGCTTGCTTGGATTGGTGGGAGGTGGAAATTAACATTAGACAGGATTTTACTGGGTCTCTTAAATGTCAACCTCGGAAAAATGATTGGCATGAGATGCTGAAACTAAATGGATGGCTATCTTCCCAACTATTCAAAGAACAGTTTCCAGCTCATTTTGCAGAAGTAATTGGTGCTCTTCCAATTCAAGAGTACATGAATCCCAGATATGGTCTTCTGAATTTAGCGGCATATATGAAAGATGGGAGTGCAAAACGCGACAAAGGTCCATATGTCTATATTTCTCATGGCTGCTCTGACAACGAAGCTTATTCCGTGCTAAATCTCTCTTATGAACCATATGATGCGGTTAATATTATGGCACATACCTCAGATGCTCCTCTCTCTACGGAACATCTTACTAAGATAACCAAGTTATTGAAAAAGCAAAGAACTCTGTGTCAAAGGGGGTTGCCAAAGATTACTGACGAGCATGCAGAAGACATGGAACTAAAGGAGCCAGAGACGCAAGGAACTGACTTTTACAGGAGAGTCAATAGAACGTCTTACATCTCTACTGAAGTGAAAACATTAGCTAGTCAGAGTTTAGATAACAATACTTCCAGCAATGGCGAATGCCGTTCTGGTTCTGATACTGAAAAGGCGCAAAGCTTCTCACCTTTCCAGAAGACCGTTCGGAGCACTGACATGTATTCTATTGCTCAGTGGGATGTCTTCCGAAGACAGGATGTGCCGAAGCTTCTAGAATACCTCAAAAGGCACGCCGATGAATTTTCATATACCAATGCATATGGCAGTGAGAAGATGGTTCACCCAATTCTAGATCAGAGCATCTTTCTGGACACTACTCACAAAATGAGACTGAAGGAGGAATTCGATATCGAACCATGGACATTTGAGCAACATGTTGGAGAAGCTGTCATCATTCCTGCTGGATGTCCATACCAGATTAGGAATTCTAAGTGTTGTGTTCATGTGGTATTGGAGTTTATGTCTCCTGAGAGTGTTGCCGAGTGTATCCAATTGACTGATGAGATCCATCTGCTTCCAGAAGACCATAAAGCAGAAGTAGACAAGCTAGAGGTGAAGAAAATGGCTCTTCATAGCGTGGAGTCGGCAATAAAAGAAATTCGCGAGCTCACTTCCAATCCAAAACATGATTGA 2865 0.4073 MGKKSTTDEVKLEIPPDNLRCSRTDGRQWRCKRRAMENVKLCEAHYLQGKIRQNKEKVPESLKLQGNMKMKKKKRKINDVVEIRSKKKKKKNGDVQLELIRMVLQREVDKKKKVKNNNNNNNNNNRKDEEFELQHYSEGELRKELPNGVMEIAPASTSCDVDFHCNGKSIVTPRYFRSKNVDRRVNFDHLQVLKKGKRKKCHWCQSSDSLNLIKCSNCQQVFFCMDCIKQRYFETQNEVKMACPVCRGTCTCKDCRASQCKDRESKDYLSGTCRVDRILHFHYLVCLVLPVLKQISEDQHIELETEAKNTGKNISDILIKQVEFGCNGKNCCNYCKTPILNLRRSCFSCSYSLCLRCCQTLSQGSPFEHINSSASNLPDKMDDCIADESCLSDDKTISSDNVTDTSILPDWAGCIGTSDSVSCPPTELGGCGNSHLDLRCVFPLSWIEELEAKAEEIVCSYDVPEMLDKNSSCSLCIDKDHKTNRYKHSKEAARREDSDDNSLFYPTVFDINSDHFEHFQKHWGKGHPVLVRDVLRSTKTISWDPLAMFCAYLERSITRYENNKDLLEACLDWWEVEINIRQDFTGSLKCQPRKNDWHEMLKLNGWLSSQLFKEQFPAHFAEVIGALPIQEYMNPRYGLLNLAAYMKDGSAKRDKGPYVYISHGCSDNEAYSVLNLSYEPYDAVNIMAHTSDAPLSTEHLTKITKLLKKQRTLCQRGLPKITDEHAEDMELKEPETQGTDFYRRVNRTSYISTEVKTLASQSLDNNTSSNGECRSGSDTEKAQSFSPFQKTVRSTDMYSIAQWDVFRRQDVPKLLEYLKRHADEFSYTNAYGSEKMVHPILDQSIFLDTTHKMRLKEEFDIEPWTFEQHVGEAVIIPAGCPYQIRNSKCCVHVVLEFMSPESVAECIQLTDEIHLLPEDHKAEVDKLEVKKMALHSVESAIKEIRELTSNPKHD* 955
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g2369 954 SUPERFAMILY Clavaminate synthase-like 515 943 - -
Tpr2g2369 954 PANTHER PROTEIN B160 13 949 - -
Tpr2g2369 954 ProSiteProfiles JmjC domain profile. 631 914 IPR003347 -
Tpr2g2369 954 MobiDBLite consensus disorder prediction 110 130 - -
Tpr2g2369 954 SMART cupin_9 616 914 IPR003347 -
Tpr2g2369 954 PANTHER JMJC DOMAIN-CONTAINING HISTONE DEMETHYLATION PROTEIN 13 949 IPR045109 GO:0032454|GO:0033169
Tpr2g2369 954 Pfam WRC 16 57 IPR014977 -
Tpr2g2369 954 Coils Coil 104 124 - -
Tpr2g2369 954 MobiDBLite consensus disorder prediction 761 786 - -
Tpr2g2369 954 ProSiteProfiles Zinc finger RING-type profile. 201 247 IPR001841 -
Tpr2g2369 954 ProSiteProfiles WRC domain profile. 15 59 IPR014977 -
Tpr2g2369 954 Pfam JmjC domain, hydroxylase 794 895 IPR003347 -
Tpr2g2369 954 Gene3D Cupin 507 923 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g2369 Tpr-Chr2 28546312 28551893 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Tpr2g2369 JmjC 1e-09 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g2369 K15601 - gmx:100802129 1219.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g1820 3 16304312 16310316 Tpr2g2369 2 28546312 28551893 PCT