Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g2365 ATGGAGGACAACCCTAGTTCATCAAGAGTTGACAGAAAAACCATTGAGAAGATTAGAAGAATTCAAATGAAAGATCTCTGCAACAAGGTCTACTCACTTCTGCCTCATCAAACTTCAAAGGAAGCTATTTCAACGCTGGATAAGGTAGAGGAAGCAACAAAATACATAAAGAAATTACAGATCAACTTAGAGAAAATGAAGGAGAAGAAGAATTTTCTACTAGGAATTCAAAGGTCAACAAATGTGGATATGGATAGAAGCAAGAACTTGGGATTCAAATCTCCAAAAATTGAGATCCAACAATTTGGTTTAGTCTTAGAGGTTGTTCTAATAACATGTTTGGATTCTCACTTTTTGTTCAATGAAACTATTCGTGTTCTTCAAGAAGAAGGAGTTGATATTGTTAATGCTAGTTATAAAGTCAATGGAGATTCTGTTTTCCATTCAATACATTGCCAGGTAGGAGAATTTGGTAATGAAGTTGCAAGGTTATCTGAGAAATTGAAGAAGTTTATATATTCTTGA 525 0.339 MEDNPSSSRVDRKTIEKIRRIQMKDLCNKVYSLLPHQTSKEAISTLDKVEEATKYIKKLQINLEKMKEKKNFLLGIQRSTNVDMDRSKNLGFKSPKIEIQQFGLVLEVVLITCLDSHFLFNETIRVLQEEGVDIVNASYKVNGDSVFHSIHCQVGEFGNEVARLSEKLKKFIYS* 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g2365 174 PANTHER ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED 1 173 IPR015660 GO:0003700|GO:0006357
Tpr2g2365 174 Gene3D - 1 89 IPR036638 GO:0046983
Tpr2g2365 174 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 9 73 IPR036638 GO:0046983
Tpr2g2365 174 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 7 59 IPR011598 GO:0046983
Tpr2g2365 174 Pfam Helix-loop-helix DNA-binding domain 9 60 IPR011598 GO:0046983
Tpr2g2365 174 PANTHER TRANSCRIPTION FACTOR BHLH162 1 173 - -
Tpr2g2365 174 Coils Coil 49 76 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g2365 Tpr-Chr2 28505296 28506486 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g2365 7 174 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G20970 41.341 4.77e-39 130
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Tpr2g2365 HLH 2.1e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g2365 - - gmx:100784418 211.846