Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g2364 ATGGTAGGAGTTGCATTCGACGTAGGAGCCGTTCCTTACAATCCCGACGGATGGGGTCCAATGGATTCCATAACCGCCGCCAACAACAACAACAACCTTCCACTCAATGTCCCTTACGCCCCTTTCAATCGCTCCGACAAATTAGGTCGAATCGCCGATTGGACCCGAAATTTCAACAACCAAACCCGAAACAGAAACCCCGCTGATTCCGCTTTCGATTTCACTCTCGACGATTCTTTCCCTGCTTCTGCCGATGACGACAATACTTTCCGTCTCGTCGACGGTAAACCACCACCAAAACCTAAATTCGGCCCCAAATGGCGTTACCAGCAACAGAAACAACTTCCTCAACGTCGCGATGAAGAACTTGAAACTAGGAAACGTGAGGCGGAGAAAGATAAAGCTCGTCGTGATCGTCAATATCATCAGAATCGTTCAAACCCTCATAACAATCGTCGTGAAGCTGCAGTTTGTAAATCGTCTGTGGAGATTCAGCCGGAGTGGAATATGCATGATCAGATTCCGTTTTCGACTTTCACCAAGCTTTCTTACAATGTCCCTGAACCTGAAGATCTTCTCATGTGTGGTGCTCTTGAGTATTATGATCGTTCTATTGATCGAACCAACCCCAAGAATGAACGTAGGCTCGAGAGGTTTAAGAATCGGAACTTCTTCAAGGTTACTACCATTGATGATCCTGTTATTAGGAGGCTTGCTAATGAGGATAAGGCCACGGTTTTTGCTACCGATACTATTCTTTCAACACTTATGTGTGCTACTAGGTCTGTTTATTCATGGGATATTGTTGTTCAGCGTGTTGGGAATAAGCTATTCTTTGATAAGCGTGATGGGTCACAGTTGGATTTGCTTGCTGTTCATGAGACTTCACAGGAGCCATTGCCCGAAGCTAAGGATGATATCAACTCTGCGCATTCATTGAGTGTTGAGGCTGCTTATATTAATCAGAATTTCTCTCAGCAAGTGTTGGTTAGGAATGGGAATAAAGATACTTTTGATGAGCCTAACCCTTTTGCTAATGAGGGTGAAGAGGTTGCTTCGGTTGCGTATAAGTATAGAAGGTGGAAGCTTGATAATGATATGTATCTTGTTGCTAGGTGTGAGGTGCATAGTGTTGTTGAATTGAATAAGCAAAAGTCATTCCTTACTGTGAATGCTTTGAATGAGTTTGATTCAAAGTATTCGGGTGTTGATTGGAGGCAGAAGTTGGAAACTCAAAGGGGTGCTGTTTTGGCTACTGAGCTTAAGAACAATGCTAACAAGTTGGCTAAGTGGACTGCACAAGCTCTTTTGGCTAGTGCTGATATGATGAAGTTGGGTTATGTGTCGAGGATTCATCCTCGGGACCATTTTAATCATGTTATCTTGGGCGTGGTTGGATATAAACCCAAGGACTTTGCTGCTCAAATTAATTTGAACACTAACAATATGTGGGGGATTGTTAAGTCTATTGTGGACTTGTGTATGAAATTGAATGAGGGGAAATATGTTATTGTGAAGGATCCATCTAAGCCTCAGATTAGGATTTATGAGGTTCCGGCTGATGCATTTGAGAACGACTATGTGGAGGAGCCAATTCCGGAAGATGAACAAGTTCAGCCTACTGCAGAGGGTGCTGATGGTGGAGAGGAAGCTGCTGTTGCTGCTACTACAGATGACGTGGAAGATAAGCCGGTCGATGCTCAAGCTTAA 1710 0.4386 MVGVAFDVGAVPYNPDGWGPMDSITAANNNNNLPLNVPYAPFNRSDKLGRIADWTRNFNNQTRNRNPADSAFDFTLDDSFPASADDDNTFRLVDGKPPPKPKFGPKWRYQQQKQLPQRRDEELETRKREAEKDKARRDRQYHQNRSNPHNNRREAAVCKSSVEIQPEWNMHDQIPFSTFTKLSYNVPEPEDLLMCGALEYYDRSIDRTNPKNERRLERFKNRNFFKVTTIDDPVIRRLANEDKATVFATDTILSTLMCATRSVYSWDIVVQRVGNKLFFDKRDGSQLDLLAVHETSQEPLPEAKDDINSAHSLSVEAAYINQNFSQQVLVRNGNKDTFDEPNPFANEGEEVASVAYKYRRWKLDNDMYLVARCEVHSVVELNKQKSFLTVNALNEFDSKYSGVDWRQKLETQRGAVLATELKNNANKLAKWTAQALLASADMMKLGYVSRIHPRDHFNHVILGVVGYKPKDFAAQINLNTNNMWGIVKSIVDLCMKLNEGKYVIVKDPSKPQIRIYEVPADAFENDYVEEPIPEDEQVQPTAEGADGGEEAAVAATTDDVEDKPVDAQA* 570
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g2364 569 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT 7 5 552 IPR007783 GO:0003743|GO:0005737|GO:0005852
Tpr2g2364 569 MobiDBLite consensus disorder prediction 113 149 - -
Tpr2g2364 569 MobiDBLite consensus disorder prediction 87 155 - -
Tpr2g2364 569 PIRSF Transl_init_eIF3d 1 547 IPR007783 GO:0003743|GO:0005737|GO:0005852
Tpr2g2364 569 Pfam Eukaryotic translation initiation factor 3 subunit 7 (eIF-3) 8 517 IPR007783 GO:0003743|GO:0005737|GO:0005852
Tpr2g2364 569 MobiDBLite consensus disorder prediction 528 569 - -
Tpr2g2364 569 Hamap Eukaryotic translation initiation factor 3 subunit D [EIF3D]. 4 529 IPR007783 GO:0003743|GO:0005737|GO:0005852
Tpr2g2364 569 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT D 5 552 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g2364 Tpr-Chr2 28499171 28502778 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g2364 1 569 Eukaryotic Initiation Factors Gene Family AT4G20980 73.322 0.0 884
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g2364 K03251 - gmx:100799613 967.222