Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g2357 ATGGAGCAAGGTGATGATGGTGGAAAAAGAGGTGAGATGAATAGGCAACTTCATCCTCATCCTCAGCCGCCTCAAGAGTGTCCTAGGTGTCAATCATTCAACACCAAGTTCTGTTACTTCAATAATTACAGTCTAAACCAACCGAGGTACTTCTGTAAATCATGCAGAAGGTACTGGACTCAAGGTGGAACATTGAGAAATGTTCCAGTTGGTGGCGGTAGTCGTAAGGGAAAGAGAGCTAAGAACTCACCTTCGACTTCCACAAGTAATTCCTCTGGGAATTCTTCTGTGTCTCAGCCAATGCTGCCACAGCCGACTATTCAGTCTACTATGGCTGCTATGGCTAAAGACTCTGCTTTGAGTTTGACTTCATTTTCCTCTGCTGCTCCTTTTTATCAAGGTGGTGGTGGGGTTGGTTACATGTCGTCTTTTGCGGCATTTAACCAGTCTCTGAATCCAAATCTATCAGCACACAATTTTGATCACCCGTCTCTGAACCTCGGTGGTGTTGGTTCTTCAAATTTAAGTCTTTTACAAGGCTTTAATGTTGCTGCTGCTCTTGGAAATTCATCACAAGGGCCAAATCGTCCATCAATGCAACAGTACTATCAAATGGCAGGTAATGGAGGAATGTTCACCTCACAACAACAAGGTTTGAACTTGATTCCCTCATCTACCACGTCAAATGCTAGTGTTGCTGCTGCTTCTAACATCTGGCCACAAAGTTTCATGAATGGTACTCTCAGCACCACTTCCATTCCTAGTGGTAATTCTGATAGGAATGGTAGTGGTGCTGGCGGTAGTGGTAGCAGTGTTGCTGGTGCTGGTTCTCCTGCTTTGACTCCAAATCAATGGCCGGATCTGGCCGGATTCAACTCTCCTCAGTGA 888 0.4516 MEQGDDGGKRGEMNRQLHPHPQPPQECPRCQSFNTKFCYFNNYSLNQPRYFCKSCRRYWTQGGTLRNVPVGGGSRKGKRAKNSPSTSTSNSSGNSSVSQPMLPQPTIQSTMAAMAKDSALSLTSFSSAAPFYQGGGGVGYMSSFAAFNQSLNPNLSAHNFDHPSLNLGGVGSSNLSLLQGFNVAAALGNSSQGPNRPSMQQYYQMAGNGGMFTSQQQGLNLIPSSTTSNASVAAASNIWPQSFMNGTLSTTSIPSGNSDRNGSGAGGSGSSVAGAGSPALTPNQWPDLAGFNSPQ* 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g2357 295 MobiDBLite consensus disorder prediction 254 278 - -
Tpr2g2357 295 MobiDBLite consensus disorder prediction 79 102 - -
Tpr2g2357 295 MobiDBLite consensus disorder prediction 254 295 - -
Tpr2g2357 295 Pfam Dof domain, zinc finger 24 79 IPR003851 GO:0003677|GO:0006355
Tpr2g2357 295 MobiDBLite consensus disorder prediction 1 26 - -
Tpr2g2357 295 MobiDBLite consensus disorder prediction 1 16 - -
Tpr2g2357 295 ProSitePatterns Zinc finger Dof-type signature. 27 63 IPR003851 GO:0003677|GO:0006355
Tpr2g2357 295 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 14 294 IPR045174 GO:0003700|GO:0006355
Tpr2g2357 295 PANTHER DOF ZINC FINGER PROTEIN DOF5.4-LIKE ISOFORM X1 14 294 - -
Tpr2g2357 295 MobiDBLite consensus disorder prediction 69 102 - -
Tpr2g2357 295 ProSiteProfiles Zinc finger Dof-type profile. 25 79 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g2357 Tpr-Chr2 28431767 28432838 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g2357 21 87 C2C2-Dof Transcription Factor Family AT5G60200 72.857 3.25e-32 118
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Tpr2g2357 zf-Dof 4.3e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g2357 - - mtr:MTR_2g014060 301.212
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g2357 2 28431767 28432838 Tpr2g2357 2 28431767 28432838 ECH