Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g2350 ATGTCAAATTCAGATTCTCCTGTAGAAGATGACCCATCTCTTCAAGAAGAAGAGGATGATGATGACGAAGAAGAAGAAGAAATTGAACAAGTAGAAGAAGAAGAAGAAGAGGATCAAGAAGAGGAAGAGCAAGTTGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGTTGAAGAGGAAGAGGAAGAGGAAGAAGAAGTTGAAGAGGAGGAGGAGGAAGTAGAAACGGTGGAGGTTGAAGAGGAGGAGGAGGAAGATGAGGAAGAAGAAGCAATAGAGATGGAAGAGGATGAAGAACAAGAAACAGTAGTAGAGGACAAAGATGAAGTTCTAGATTCCATGCCTGTTCAACATAGAAAAGAAACAGTAGAGGTGGAAGAAGAAGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAAGAGGAGCAGGAAGAGGAGGAGGAGGAGGAAGAAGAAGAAGAACTACAACAACAAGAAGAAGAAGAAGGAAAAGAAAAAGAAGAGGCAATAGTGATGGAAGAGGAGGAAGAACAAGAAACAGTAGTTGAGGAGAAAGATAAAGACAAAGATGAGGTTCCAGATTCTCTTCCCAATGCGGATAAACACAGCAAAGAAATAGTAAAGGTGGAAGAAGAGGAAAAAGAAGCAATAAAGACGGAGGAGGAGGAAGAACAAGAAACAGCAATTGAGGAGGAAGAACCAGAAACAGCAGTTGAGGAGAAAGACAAAGACAAAGACGAGGTTCCAGATTCTCTTCCCGATGCGGATAAACATAGCAAAGATTCAAGCCAGCATATGGAGCTTGATGAGAAAGAGGACAATTTGGGGTCAGTTTCTTCTGTGCCCGAGAACCCTGAAGTAATACGGCCAGAACATGATATGGACGGGAATGATGCCATGCTTAAAGCATCTGTTCCGTCACATGAGGAATTGACATTGAAAAAGGAGGAGTTCCCCTTGAAACAAGAAGTTTCGAGTCCTCCAAAACCAAGTGAAAACTTGATTCCTGCTGAAGATGGGAAAAATCAAGGCTTAAACGTTGATGTTGAAAATTCCGGACATCTTCAGAGGAAAATCTTTGGAGGATGCAGTGAACCAGATTGCAATACCAAAGTTTCTTTATCTGATGTTAAGGACATGGATTCTAGGGCCACCAAGTCATCTAGTGATATGGAAAAAGATGCGGTTACTGGAATCACGCCGAGGGGTAATTTTGTTGAAGATGCTGATGGCGGTCAGAACTCTCGGGAGAAAATTATGCAGTCAGAGACGGAGCCACGGGTTGATGTAAAACAAAAGCAGTCAAGTAGGATTAGAAGTCTGTCCCCCAGTGCTGCGATTAAAGATGGAAACAAAAGGCCTGCAATTACATGTGCTTTTTTCGCTCAAGGTTGGTGCATCAGAGGCAGTTCATGTAGCTTTCTTCATATAAAGGATAGTGTGAATAATACCGACCAGGGGGTTGAAGGAGATCTAGTTACTGCACATCAGAAGAGAGAATTGAAATTGGAAAAAGGTGTTAAGGAAAATGTTGATAGGTCAAGAACGAATGAGGGAGAAGCAAGTCCAAGTTGGCATTCATCTCGTGAAAAGGAGAAGTTTCCAATGAGGGACAGCTTGTTTCCAGAGAATAGATCTGCATTTAATACATCAAACAATTATTTCGGCTCAAATCTTTCCTCATTTTCATCCCGTGAAGAGGGAATGACTGCTATTCGAAACCATCATATGTACAGAGGATATACATCCAGAGAAGATTTTAGTTCATCTTTAGGTGCAAGTGCTTTGGACTCTCAAAAGCTTTTGAACAGTGAGAAGGAATATCACACTCATAAGTCCTCTTTCTCTTCAGATTGGGAAGATTTGCATCGAGTTGGTTCATCTAGGGTTCCACCACATGCTAATGGATATAAACTAAAAACTGGCTCTCATGATTGGGAACCTTCTGTTCCATTTCGACCATCCTTTTTTATCACTTCTATGAATGTATCATCCCCCGGAGATCTTTATGACCCTCTACGTGATAGCGTTGAGATACCTAATATTGGAGACGGGTCTTTGAAAGCTTTTCTAATTCGAGGGTCATCTATCCAGGCTTCATCACAGGTACGGACATATGATGATTCTGCTGCAGGTGGGAAACACATGTCTGATCTTAATGATGAGAAAAGTTCTGTATCTTCACATAATAAAATTTATGAAAATGAGCCAAACAGAAGTTCTGTTCCTCGTGGGAACGATTCTCTTGCAACCAAAACAGAGATAACATCAGGAACTTGTGCAAACTACCATAATGGTAACATAGGTGTGGGACGACATGCCTTTGGTGCTGAAGATAGGACGGAAACAGTGAAAAAACGGACTGAGCCTGATGCCATGCATCATGGTGATGGATCAGAGCACAGAAAGAAGAAAGTAGCAAAGGATAATAAAATTCATGAAATGGAGGTTGACTTTCCGACGGATAGCAGTGTGCACAAAGAAACAAAGGCGCTGAAATTTTTTCGGCCAACCCTTGTTGATCTAGTGAAAGAGTTGCTAAAACCATTTTGGCACGAGGGTCGTGTCAGCAAGGATGCACATGTACTGATAGTTAAAAAATCAGTTGACAAGGTTATTAGCACTTTAGAGCCACACCAAATTCCGACCACTGAAGATACTGCTAAGCAATATGTTTCTTCATGTCGGCAGAAAATTGCGAAGTTAGTCCAGGGATATGTCAATAAATATAGCAAACCTTGA 2748 0.4167 MSNSDSPVEDDPSLQEEEDDDDEEEEEIEQVEEEEEEDQEEEEQVEEEEEEEEEEEEVEEEEEEEEEVEEEEEEVETVEVEEEEEEDEEEEAIEMEEDEEQETVVEDKDEVLDSMPVQHRKETVEVEEEEEEEEEEEEEEEEEEQEEEEEEEEEEELQQQEEEEGKEKEEAIVMEEEEEQETVVEEKDKDKDEVPDSLPNADKHSKEIVKVEEEEKEAIKTEEEEEQETAIEEEEPETAVEEKDKDKDEVPDSLPDADKHSKDSSQHMELDEKEDNLGSVSSVPENPEVIRPEHDMDGNDAMLKASVPSHEELTLKKEEFPLKQEVSSPPKPSENLIPAEDGKNQGLNVDVENSGHLQRKIFGGCSEPDCNTKVSLSDVKDMDSRATKSSSDMEKDAVTGITPRGNFVEDADGGQNSREKIMQSETEPRVDVKQKQSSRIRSLSPSAAIKDGNKRPAITCAFFAQGWCIRGSSCSFLHIKDSVNNTDQGVEGDLVTAHQKRELKLEKGVKENVDRSRTNEGEASPSWHSSREKEKFPMRDSLFPENRSAFNTSNNYFGSNLSSFSSREEGMTAIRNHHMYRGYTSREDFSSSLGASALDSQKLLNSEKEYHTHKSSFSSDWEDLHRVGSSRVPPHANGYKLKTGSHDWEPSVPFRPSFFITSMNVSSPGDLYDPLRDSVEIPNIGDGSLKAFLIRGSSIQASSQVRTYDDSAAGGKHMSDLNDEKSSVSSHNKIYENEPNRSSVPRGNDSLATKTEITSGTCANYHNGNIGVGRHAFGAEDRTETVKKRTEPDAMHHGDGSEHRKKKVAKDNKIHEMEVDFPTDSSVHKETKALKFFRPTLVDLVKELLKPFWHEGRVSKDAHVLIVKKSVDKVISTLEPHQIPTTEDTAKQYVSSCRQKIAKLVQGYVNKYSKP* 916
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g2350 915 MobiDBLite consensus disorder prediction 310 324 - -
Tpr2g2350 915 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 460 478 IPR000571 GO:0046872
Tpr2g2350 915 MobiDBLite consensus disorder prediction 732 748 - -
Tpr2g2350 915 PANTHER PROTEIN FRIGIDA-ESSENTIAL 1 227 914 - -
Tpr2g2350 915 MobiDBLite consensus disorder prediction 381 443 - -
Tpr2g2350 915 MobiDBLite consensus disorder prediction 126 183 - -
Tpr2g2350 915 MobiDBLite consensus disorder prediction 218 239 - -
Tpr2g2350 915 PANTHER PROTEIN FRIGIDA-ESSENTIAL 1 227 914 - -
Tpr2g2350 915 Coils Coil 14 102 - -
Tpr2g2350 915 MobiDBLite consensus disorder prediction 422 436 - -
Tpr2g2350 915 ProSiteProfiles Zinc finger C3H1-type profile. 454 481 IPR000571 GO:0046872
Tpr2g2350 915 MobiDBLite consensus disorder prediction 1 344 - -
Tpr2g2350 915 MobiDBLite consensus disorder prediction 108 125 - -
Tpr2g2350 915 MobiDBLite consensus disorder prediction 785 810 - -
Tpr2g2350 915 MobiDBLite consensus disorder prediction 10 107 - -
Tpr2g2350 915 Coils Coil 201 231 - -
Tpr2g2350 915 MobiDBLite consensus disorder prediction 710 748 - -
Tpr2g2350 915 Coils Coil 117 179 - -
Tpr2g2350 915 SUPERFAMILY CCCH zinc finger 454 478 IPR036855 GO:0046872
Tpr2g2350 915 MobiDBLite consensus disorder prediction 507 538 - -
Tpr2g2350 915 MobiDBLite consensus disorder prediction 184 217 - -
Tpr2g2350 915 MobiDBLite consensus disorder prediction 716 731 - -
Tpr2g2350 915 MobiDBLite consensus disorder prediction 240 278 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g2350 Tpr-Chr2 28359093 28366301 Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Tpr2g2350 zf-CCCH 8.5e-05 CL0537
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g2350 - - cam:101503101 990.334
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g2350 2 28359093 28366301 Tpr2g2350 2 28359093 28366301 ECH