Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g2347 ATGGTCAAGGTTCACGAGTTGAGACAGAAAACCAAAGCTGATCTAATAGCTCAGCTGAAAGACCTTAAAGCTGAACTCTCCTTGCTTCGTGTTGCTAAAGTCACCGGTGGTGCACCCAACAAGCTCTCAAAGATTAAGGTGGTGAGGTTGTCTATTGCTCAGGTTTTCACAGTGCTTTGCTCAGGTTTTAGTTTAGTGATTGTTGTAATACTGGCATCATTGAAGACCGAGAGGGAGAAGAAAATGGAGACATATTTCCCAGTAAGGAAATATGCTATCAAAGCTTAG 288 0.4236 MVKVHELRQKTKADLIAQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVFTVLCSGFSLVIVVILASLKTEREKKMETYFPVRKYAIKA* 96
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g2347 95 Gene3D - 1 61 IPR036049 GO:0003735|GO:0005840|GO:0006412
Tpr2g2347 95 Hamap 50S ribosomal protein L29 [rpmC]. 2 62 IPR001854 GO:0003735|GO:0005840|GO:0006412
Tpr2g2347 95 SUPERFAMILY Ribosomal protein L29 (L29p) 2 59 IPR036049 GO:0003735|GO:0005840|GO:0006412
Tpr2g2347 95 CDD Ribosomal_L29_HIP 6 59 - -
Tpr2g2347 95 TIGRFAM L29: ribosomal protein uL29 6 60 IPR001854 GO:0003735|GO:0005840|GO:0006412
Tpr2g2347 95 Coils Coil 12 32 - -
Tpr2g2347 95 PANTHER 60S RIBOSOMAL PROTEIN L35-LIKE 2 60 - -
Tpr2g2347 95 PANTHER 60S RIBOSOMAL PROTEIN L35-LIKE 72 94 - -
Tpr2g2347 95 Pfam Ribosomal L29 protein 6 59 IPR001854 GO:0003735|GO:0005840|GO:0006412
Tpr2g2347 95 PANTHER 60S RIBOSOMAL PROTEIN L35 72 94 IPR045059 GO:0000463|GO:0022625
Tpr2g2347 95 PANTHER 60S RIBOSOMAL PROTEIN L35 2 60 IPR045059 GO:0000463|GO:0022625
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g2347 Tpr-Chr2 28320990 28323706 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g2347 2 94 Cytoplasmic Ribosomal Protein Gene Family AT2G39390 56.303 2.49e-36 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g2347 K02918 - jre:109003019 123.25