Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g2346 ATGGAAAATCACCAAAACCAAACCAAAAACCCAGACCAAGACCTACACAAGAAACAACACCACCAACACCAAGAGGGTTGGGGCACGTGGGAAGAGCTTTTACTAGCGTGCGCCGTCAACCGTCATGGTTTCAAAGACTGGGACACCGTCGCTATGGAGGTTCAGTCCCGAACCAACCGCCCTACGCTCCTCGCCACCGCACACCACTGCGAACAAAAATTTTACGATCTAAACCGTCGATTCACAGACGACGTTCCTCCGCCGCAACAGAATGGAGACTCCGCCGACGTTGATTCCGATCACGTTCCCTGGCTTGAGAAATTGCGTAAAGAACGCGTTGCTGAGCTCCGGCGTGATGTCCAACGCAGCGACGTCTCCATTTTGTCGTTGCAGTTGCAGGTGAAGAGATTAGAGGAAGAGAAAGCGAAAGAGAATGACGGAGAAGAAGATAATAAACCAGATCTGGCGGTTACCGGCGAGGAACAGCTGCCGGAAAATGAAAAAACCGGGGGAGAAATGGAGGAGGATGAACCGGCTAATTCCGAACCGGATATTCGACGACTCGATGATAGCACAACTAATACTGATAAACTATTACCAACCACTGGAGAGGAATCGGACCGGGATAATCAATCGGTTAATGAGTCGAATTCAACCGGTTCGAGGTTTGATGCAGCGAAAACCGATGTAAAGTTAGAAACCGGCCCGGTTCATGTTAAATCCGGTCCAAACGAGCCGGTTCAAACCGGGAGGAAGAAAAAATCGATTGAAGAAGAATCGAATAACGGAAGCTATAATAACGAGGCTAAAGTTTTAACGTGTGAGTCGGTGCCTCCGAGTGAGGAGAGGAAAGTGGAAGGTGATTCGTCCGAGTTACATGATTCGGTGACTCGCTCGGTGGAGACAGGGACGAGAGAGAGTAGCGAGGTGCAGAGTTCTTCGAGTTTGTCGAAAACGAGGAAGATACGTCGGAGGAAGGATGTTTCCGTTGGAGATGTGGTGCCGGAGAATGAGGACGTGGCGATGGTGAAATCAGAACCGTTGGTTGGCGTGTTGGAGATGATCAAAAGACATGAAAAATTTTCAATGTTTGAACGGCGTCTTGAAAAAAACCAGGATTTGGATAGATACAAAAACATCGTGAGACAGCACGTGGACTTGGAAACTATACAATTGAGACTCCAAAAAGGTCACTATTCCTCATGCACTAGCTCATTCTTCCGTGACCTCCTCCTCCTCTTCACCAATGCCACTGTGTTCTTCCCTCGCAATTCATCCGAATCACGGGCGGCGCATCAGCTGCAACACCTGGTTATTGCCGAGATGAAAAGCTCTAGCCAAACACAATCCGACCCTATCACTCAGAAGACCGATTCACTCCCTCCGAAAGCTGCTCCTATATTAGTTTGCCGCAAACGCAGTGCAATCTCAACTAAGCCTTCCGCAACCACCTTGAGCCAAAAGGGTGATCACCAATCCGTCATCAATGTCAAGAAGGAAAGGCCATCTTTTGATGCTAAACCAACCTTGAAACCAAGTAATTCTGAGACAGATGAAGAGGAGCCTCCTATGGCTATAGAAAAGCCTGTAACTGGAGCCAGAAGCAGAAGAAGCAACAAGAATCTCAACAGCAATGCCGACAACAAGAAACTACCGTCTAACTCCACTCCTAAAACAGTTTCCTCGGCAACCAAGCCTGCCGAGAACCCAAAATTAGATAAGAACAAAGCAGAGGGGGGGTCCGACAAGAAGAAGAATGCTGCTGCTGATTTCTTGAAGAGAATAAAGCGAAATGCCTCTGTGGAGGTGCTGAGAAGCAGTGGTGGTGGAGGAGGAGGTAGTAGTGGCAGCAGTAAGGGTGGTGGAGGTAGTGCTAATATGAAAGAGCAAAAGAAAGTAGTGAATAATGGAAAGGGTGAGAAAGGTAAAGAAAGAGCTTCAAGGTATAACGATGGAGGAGAGTCCGGGAATAAGAGGAATAAGAATATTGATAACTCTAGGAGGAATGTTGGAAGACCTCCAAAGAAAGGAGCAGAGACCAATGTAGTTAGTACAAAGCGTGGAAGGGAAAGTAGCGCAAGTGGTAGCAAAGATAAGCGACCAAAAAAACGTTCAAAGAAATGA 2124 0.4755 MENHQNQTKNPDQDLHKKQHHQHQEGWGTWEELLLACAVNRHGFKDWDTVAMEVQSRTNRPTLLATAHHCEQKFYDLNRRFTDDVPPPQQNGDSADVDSDHVPWLEKLRKERVAELRRDVQRSDVSILSLQLQVKRLEEEKAKENDGEEDNKPDLAVTGEEQLPENEKTGGEMEEDEPANSEPDIRRLDDSTTNTDKLLPTTGEESDRDNQSVNESNSTGSRFDAAKTDVKLETGPVHVKSGPNEPVQTGRKKKSIEEESNNGSYNNEAKVLTCESVPPSEERKVEGDSSELHDSVTRSVETGTRESSEVQSSSSLSKTRKIRRRKDVSVGDVVPENEDVAMVKSEPLVGVLEMIKRHEKFSMFERRLEKNQDLDRYKNIVRQHVDLETIQLRLQKGHYSSCTSSFFRDLLLLFTNATVFFPRNSSESRAAHQLQHLVIAEMKSSSQTQSDPITQKTDSLPPKAAPILVCRKRSAISTKPSATTLSQKGDHQSVINVKKERPSFDAKPTLKPSNSETDEEEPPMAIEKPVTGARSRRSNKNLNSNADNKKLPSNSTPKTVSSATKPAENPKLDKNKAEGGSDKKKNAAADFLKRIKRNASVEVLRSSGGGGGGSSGSSKGGGGSANMKEQKKVVNNGKGEKGKERASRYNDGGESGNKRNKNIDNSRRNVGRPPKKGAETNVVSTKRGRESSASGSKDKRPKKRSKK* 708
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g2346 707 MobiDBLite consensus disorder prediction 277 300 - -
Tpr2g2346 707 MobiDBLite consensus disorder prediction 1 23 - -
Tpr2g2346 707 MobiDBLite consensus disorder prediction 443 465 - -
Tpr2g2346 707 CDD SANT 27 58 IPR001005 -
Tpr2g2346 707 MobiDBLite consensus disorder prediction 478 707 - -
Tpr2g2346 707 MobiDBLite consensus disorder prediction 139 156 - -
Tpr2g2346 707 MobiDBLite consensus disorder prediction 165 193 - -
Tpr2g2346 707 ProSiteProfiles Bromodomain profile. 356 428 IPR001487 GO:0005515
Tpr2g2346 707 Coils Coil 120 147 - -
Tpr2g2346 707 Pfam Bromodomain 351 431 IPR001487 GO:0005515
Tpr2g2346 707 SUPERFAMILY Bromodomain 347 444 IPR036427 GO:0005515
Tpr2g2346 707 Gene3D - 17 75 - -
Tpr2g2346 707 MobiDBLite consensus disorder prediction 443 457 - -
Tpr2g2346 707 MobiDBLite consensus disorder prediction 301 317 - -
Tpr2g2346 707 Gene3D - 349 461 IPR036427 GO:0005515
Tpr2g2346 707 MobiDBLite consensus disorder prediction 478 492 - -
Tpr2g2346 707 MobiDBLite consensus disorder prediction 139 327 - -
Tpr2g2346 707 MobiDBLite consensus disorder prediction 633 674 - -
Tpr2g2346 707 PANTHER BROMODOMAIN-CONTAINING PROTEIN 8 13 707 - -
Tpr2g2346 707 MobiDBLite consensus disorder prediction 569 600 - -
Tpr2g2346 707 SMART bromo_6 341 447 IPR001487 GO:0005515
Tpr2g2346 707 PANTHER BNAC04G22430D PROTEIN 13 707 - -
Tpr2g2346 707 CDD Bromodomain 351 442 - -
Tpr2g2346 707 MobiDBLite consensus disorder prediction 610 624 - -
Tpr2g2346 707 Pfam Myb-like DNA-binding domain 27 75 IPR001005 -
Tpr2g2346 707 SMART sant 23 80 IPR001005 -
Tpr2g2346 707 MobiDBLite consensus disorder prediction 535 568 - -
Tpr2g2346 707 MobiDBLite consensus disorder prediction 493 525 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g2346 Tpr-Chr2 28296983 28304069 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Tpr2g2346 Bromodomain 1.5e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g2346 - - adu:107458545 830.091