Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g2341 ATGGAGTCTATTGTAGTTTTACTCTTGTTACTCTTCTCTTGCTCAACATTCACTTCCACAGAAGCCTATGATCCGTTAGATCCAACTGGAAATATAACACTCAAATGGGATGTCATGAGTTGGACTGCAGATGGCTATGTTGCTATTGTTACAATGTACAACTTTCAACAATATCGACATATTCAAGAGCCAGGATGGACACTAGGGTGGACATGGGCTAAAAAGGAAGTAATTTGGAACATGATGGGAAGCCAAACAACAGAACAAGGAGATTGTTCGAAATTCAAAGCAGGAACTCCACATTGTTGTAAGAAAGATCCAACGGTAGTTGATATGTTGCCAGGAACTCCTTACAACCAACAGATTGCAAATTGTTGCAAAGGTGGAGTCTTGAATTCATGGGCTCAAGATCCAAGCAATGCAGTAAGTTCTTTTCAACTTAGTGTTGGTTCTGCCGGAACAACTAATAAAACAGTAAAACTTCCGAGGAATTTCACACTCAGAGCACCTGGTCCTGGTTACACTTGTGGTCCTGCAAAAATTGTTAGACCAACTCAATTTATTACCAGTGATAAGAGGAGAGTGACACAAGCCCTGATGACCTGGAACATTACTTGTACTTACTCTCAATTCTTGGCTCAAAAGACACCAACTTGTTGTGTTTCACTCTCATCCTTCTATAATGACACGGTAGTAAACTGCCCAACCTGCACATGTGGCTGCCAAAACAAAACACAACCTGACAGTTGTGTAAATCCAGACTCTCCACATTTATCTTCAATAGTATCATCATCAGGAAAACCTGCAAATACACCTCTAGTTCAATGTACAAGTCACATGTGTCCGATACGAGTGCATTGGCACGTGAAGCTCAATTATAAAGAGTATTGGAGGATCAAGATCACAATCACAAATTTCAATTATAGAATGAATTACTCACAATGGAATCTTGTGGTGCAGCATCCCAATTTTGATAATCTTACTCAGCTTTTCAGCTTTAAGTACAAGTCACTAAATCCCTATGAGGGCTTAAATGATACAGGTATGTTGTGGGGAGTAAAATTCTACAATGATTTTCTTTCATCAGCCGGATCATTTGGAAATGTGCAATCAGAAATCTTGTTTAGAAAAGATAAATCAACTTTCACATTTGATAAGGGATGGGCCTTTCCAAGAAGGATTTATTTCAATGGTGATAACTGTGTTATGCCTCCTCCAGATGCATACCCTTGGTCACCAAATGCATCTTCAAAACTTGTTTTTTCTTTAGTTATTACACTCGTAGCCACTTTAGCTTCTTTATTAATCATATTGAATTGA 1320 0.3864 MESIVVLLLLLFSCSTFTSTEAYDPLDPTGNITLKWDVMSWTADGYVAIVTMYNFQQYRHIQEPGWTLGWTWAKKEVIWNMMGSQTTEQGDCSKFKAGTPHCCKKDPTVVDMLPGTPYNQQIANCCKGGVLNSWAQDPSNAVSSFQLSVGSAGTTNKTVKLPRNFTLRAPGPGYTCGPAKIVRPTQFITSDKRRVTQALMTWNITCTYSQFLAQKTPTCCVSLSSFYNDTVVNCPTCTCGCQNKTQPDSCVNPDSPHLSSIVSSSGKPANTPLVQCTSHMCPIRVHWHVKLNYKEYWRIKITITNFNYRMNYSQWNLVVQHPNFDNLTQLFSFKYKSLNPYEGLNDTGMLWGVKFYNDFLSSAGSFGNVQSEILFRKDKSTFTFDKGWAFPRRIYFNGDNCVMPPPDAYPWSPNASSKLVFSLVITLVATLASLLIILN* 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g2341 439 PANTHER PROTEIN COBRA 4 435 IPR006918 GO:0010215|GO:0031225
Tpr2g2341 439 PIRSF COBRA 1 439 IPR006918 GO:0010215|GO:0031225
Tpr2g2341 439 PANTHER COBRA-LIKE PROTEIN 4 435 - -
Tpr2g2341 439 Pfam COBRA-like protein 46 209 IPR006918 GO:0010215|GO:0031225
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g2341 Tpr-Chr2 28242382 28246000 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g2341 6 438 COBRA Gene Family AT3G02210 73.041 0.0 701
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g2341 - - gmx:100815779 847.81