Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g2340 ATGGAATTTGATAATGGTAAAAAGAATCATAACTGCACATTTAGAGAACTGAAGTTGGTTTCGTTTGTCGCTTTATGCCTCATTCTAATCTCTCCTGCTGAGGCATTTGATCCATTGGATCCAACAGGAAATGTGACAATAAGATGGGATATCATGTCCTGGACATCAGATGGTTATATGGCAACTGTAACATTATTTAACTTTCAACTATACCGAAATATTATGAGCCCTGGATGGACACTAGGATGGACATGGGCAAAGAAAGAAATCATATGGGCCATGATGGGAGCACAAGCTACAGAACAAGGAGATTGTGCAAAGTTCAAGTTAAAGATTCCTCATAGTTGCAAAAGAAGTCCTCAAGTTGTTGATTTATTACCTGGAGCTTCTTTCAATATGCAATACACAAACTGTTGCAAAGGTGGTGTGTTAACCTCTTGGGGACAAGATCCTTCAGGTGCAATCGCGGCATTTCAAATGGGTGTAGGACTCTCTGGAAGAACTAACAAGACGGTGAAACTCCCTCAGGATTTTAAATTGCTTGGACCGGGCGCTGGATATTCGTGTGGCCCTGCTAAGAGAGTTCCTTCAACTGTTATTCTTACGGATGACCGTAGGCGAAAAGCTCAAGCTTTGATGTCCTGGAATGTGACATGTACTTATTCACAATTTCTTGCTTCCAAGAACCCTAGCTGTTGTGTTTCTTTGTCAACCTTTTACAATGACCAAGTCACAGCTTGCCCAGCCTGTGCTTGTGGTTGTCAAAATAATGCTACTTGTGTCACGAAAGATTCGAAGATACTGAAAGAGGCTGAGAATAATAAGACTAGAAAGAGTGATATTATGACACTGACACCAAAACCATTGTTACAATGTACACGCCACCTTTGTCCTGTTCGTGTGCATTGGCATATAAAAGACAACTATAAGGACTATTGGCGTGTGAAGATTGCAATCATCAACTTCAACTATAGAATGAATTACACAGAATGGGGTCTTGTTGTGCAACACCCTAATCTTAATAATGTTACACAAGTCTATAGCTTTGAATACATGCCACTTCTTCCCTATCAAGCCATAAATGACACAGGAATGTTCTATGGTTTGAAATACTACAATGATCTATTAATGGAAGCTGGGGCTAAAGGGAATGTACAATCTGAGGTACTTATGAAAAAGGACAAGAACACCTTTACACTCAAGCAAGGATGGGCTTTTCCTAGAAGGGTATACTTCAATGGTGATGAATGTATGCTACCACCTCCTGATTCATATCCATTTTTGCCAAATTCTGCTGATAGGCTACCAAAAAGTGTTGTAACAATGGTAGCCTATGTGATTTTTGCATCATTTTTCATTTGGTTGTGA 1368 0.3977 MEFDNGKKNHNCTFRELKLVSFVALCLILISPAEAFDPLDPTGNVTIRWDIMSWTSDGYMATVTLFNFQLYRNIMSPGWTLGWTWAKKEIIWAMMGAQATEQGDCAKFKLKIPHSCKRSPQVVDLLPGASFNMQYTNCCKGGVLTSWGQDPSGAIAAFQMGVGLSGRTNKTVKLPQDFKLLGPGAGYSCGPAKRVPSTVILTDDRRRKAQALMSWNVTCTYSQFLASKNPSCCVSLSTFYNDQVTACPACACGCQNNATCVTKDSKILKEAENNKTRKSDIMTLTPKPLLQCTRHLCPVRVHWHIKDNYKDYWRVKIAIINFNYRMNYTEWGLVVQHPNLNNVTQVYSFEYMPLLPYQAINDTGMFYGLKYYNDLLMEAGAKGNVQSEVLMKKDKNTFTLKQGWAFPRRVYFNGDECMLPPPDSYPFLPNSADRLPKSVVTMVAYVIFASFFIWL* 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g2340 455 PANTHER PROTEIN COBRA 1 455 IPR006918 GO:0010215|GO:0031225
Tpr2g2340 455 Pfam COBRA-like protein 59 222 IPR006918 GO:0010215|GO:0031225
Tpr2g2340 455 PIRSF COBRA 10 455 IPR006918 GO:0010215|GO:0031225
Tpr2g2340 455 PANTHER COBRA-LIKE PROTEIN 1 455 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g2340 Tpr-Chr2 28238606 28241951 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g2340 19 444 COBRA Gene Family AT3G02210 58.741 0.0 566