Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g2335 ATGGAAGAAAGCAACCAGAATGAAATCCAAATCCAAATCCGAACCCTAACCGGCGAATCTATCATTCTTCACATCACTCCCTCTGCCACCGTCCAACACCTCAAGCTTCTACTCAACAACTCTTTCCCTCCCGCCACCAATTCCCCCAATTTCCATCTCTTTTTCAAGGGCAATAAATTGCAATTGCATGATGAAATTGGTTCTTATATAATTCAATCTGGGGAGTCTCTCGTCTTGATTCCATTTGCCAAGAAGGAACTAACTCAATCGGACAAACCGGATTCAGTTTTCTCTTCTCCAAATGTTGCTTGCAATGCTTCAACCTCTAATCTCGCGGATACAATGTGGTCTAGTATAATGGAAGATTTGTCTGAATTACGCGAAACCGCTGAAAAAATTGATGATAATAATGTATCCAATTTGGAAAGGAATAAAGAGAGAACTGCGGAGGTTGAAATCAAAAGGGGTTTGGGTTCTGAGAAAGAGATAGAGCTTCCTTATCATTTGATATTCAATACATTGGATTGCACTAATGAGAGTGCTCTTGGAGAGAGTAATTGTGAGGTTTTTTCTAAGGTTTTGGACTCAGTGAATTGTTTATCTGATTTGCCTCTTGGACATTGCAAGTTGTTCAAGAGAGCATGTTTGACGAAGCGAACTTCTGGCAATGATGGTGGTGGTGTTACTTGCTTGTGTCCACCGTGGTTGAAGACGGTTGTGAAGTCGTTTGCTTTCGTAAATATTTTTTCCGCATTTCTTCATTTGCAGGGTAGAAAGGTCACCACGAGTCTACTGGAAGAAGGACTTGACCAGTTTTCCAAGTTTGGAGTCAAACTTGGTCTCCATGAGATGAAGCATCTTTCCCTTCTTTGTCCTCATCTAGTAAGTTTTGTAGATGACATAGAAAAGGCGAGTTTTGGTGATGTCATTATTGTAGTAAATCATTCAACTAGCAATGAAGATCAAATTGAAGATCCTAAAAGAGCTCGCAAGTCATTGTATATTTCAAAGATTGTCAGTACATTAAAGCGAAGGGACAGTTCTTTCCGAAAATATCTGGGGTGGGCTTTTGAGCAGATTCAGTTTGAAATTGGAGATGAGATGAACGTGAGAATTTCTTTCGAAGAACTGCTCGCAGCAGTCGAGGACTGTGATTTTACCAGAAAAGGAAACAAATCAAAACGTGTAAAGAGAAGCTCAACTTCCTCAAGACCTGACATGGATCACTTTGGGTGTCATGACACAAAGTCATTAATGGCTGTGGACATGGTTGAACATCTTAAGAAAGGAATTGGATCTGAAGGACAGATTGTGCATATTGAAGACATATGTGCCAGAAAAGCCATTTACAGTGAGATCCCAGCTGAACTATCAGAGAAAACGAGATCTGCACTAAAGTATATTGGAGTTTCCAAAATGTATAATCACCAGGCAGAATCTATACAAGCCTCCCTTCTCGGGAAGAATGTTGTTGTGGCTACAATGACATCTAGTGGAAAATCTCTTTGCTACAACCTGCCTGTTCTAGAAGAGTTGTTTGAGAATTCATCATCATGTGCTTTGTACATATTTCCTACAAAGGCATTAGCTCAAGATCAATTAAGATCTTTGTTACACATGACGAAAGAATTTGATGTTGACTTGAATATTGGTATATATGATGGTGACACTTCTCATAGTGAAAGGACTTGGCTACGTGATAATTCTAGACTGCTAATCACAAATCCAGATATGTTACACATATCAATCTTGCCCCACCATCGGCTATTTAGTCGGATTTTATCGAATCTAAGGTTTCTGGTAATTGATGAAACTCATACCTACAAGGGAGCATTTGGATGTCATACCGCTCTTATATTAAGGAGGCTTAGGCGACTCTGCTCACATGTATATGGAGCTGTTCCTTCGTTTATTTTTTCTACTGCAACTTCTGCGAATCCTCATGAGCATTCTATGGAACTTGCAAATTTACCCAAAGTGGAGTTATTTCAGAAAGATGGGAGTCCATCTGCAAGAAAACTTTTCATCCTTTGGAATCCTGTTTTGCGCCCAAAAACTATATTCAATAAAGCTCGGTTTGCTATGGATAATGATGAGTTGGCAGATGAAAGTGCTAATTTTGTTCGTTCAAGCCCAATCGTGGATGTTTCCCGCCTTCTTGCAGAAATGGTTCAGCACGGTCTTCGCTGCATTGCATTTTGTAAATCACGGAAACTTTGCGAGCTGGTTTTATCCTATGCACGTGAGATTCTTCAGGAGACAGCCCCACATCTCCTGGATTCCATATGTGCATATCGTGGTGGCTACATTGCAGAGGAAAGAAGAAAAATAGAGAGTGCATTTTTTGGTGGTAAAATTTGTGGTGTTGCTGCAACTAATGCTCTTGAATTGGGCATTGATGTTGGAGAAATTGATGTCACTCTGCATCTAGGATTTCCTGGTAGTATTGCAAGCTTGTGGCAACAAGCCGGTAGAGGTGGGAGGCGAGCTAGACCGTCTCTTGCTATCTATGTTGCATTTGGTGGACCACTTGATCAATACTTCATGAACAATCCTAGAAAACTTTTTGAAAGACCAATTGAATGCTGTCATATTGATTCTCAAAACAAGCAGGTTCTTGAACAGCATTTGGTCTGTGCAGCTCATGAACACCCTCTGAGTGTGCAGTATGATGAGCAGTATTTTGGTGCTTGCTTAGAGAGTTGTTTGAATTCTCTGAAAGATAGAGGATACTTATGTCCTGATCTGTCTGATTCTTCTAGAATTTGGAACTATATTGGTCCTGAGAAATTACCTTCACATGCAATCAATATCCGCGCAATAGAAACTGTTAGATATAGTGTCATAGATCAGAAAAAGAATGAAGTCCTTGAAGAGATAGAGGAAAGCAAGGCTTTCTTTCAGGTATACGAAGGTGCAGTGTACTTGCGTCAGGGAAAAACCTATTTGGTTGAAAAATTAGATCTATCTAGCAAAACTGCTTTCTGCAAAGAGGCTGATCTGAAGTATTATACAAAGACTCGAGACTACACCGATATCCATGTCATTGGGGGTAATATTGCTTATCCAGTAATTGATTCCACCATGTTTACAAAAACAAATGTCCGTGCTAATGCATGCCAAGTGGCAACTACTTGGTTTGGATTTTATCGTATTTGGAGAGGAAGCAATCAAATCATTGATGCAGTTGATCTAGCACTTCCTCAATATTCATACGAGTCCCAGGCAGTCTGGGTACCAGTGCCACAGTCAATAAAAGAAGCAGTAGTCAAGCAAAATTATGATTTCCGTGGAGGTTTGCATGCTGCTTCACATGCTGTTTTACACGTAGTGCCTTTACATATAGTGTGCAACTTGTCTGATCTGGCTCCTGAGTGTCCAAATCCTCATGACAGCCGATATTATCCTGAAAGAATCTTAATATATGATCAAAATCCTGGAGGGTCTGGAATTTCAGTACAGGCTCAACCCCATTTCTCAAAGTTCCTGACAGCTGCTCTGGAAGTGCTCACATGTTGCCGCTGTTCGGCTGAAGTTGGTTGCCCTAATTGTGTTCAGAGCTTTGCTTGCCACGAGTATAACGAAGTTCTGCACAAGGATGCGGCCATTATGATCATCAAGATGCAGAGAACTAGTACTCTAAGGAATGTGCTGGTTATTTTCAAGTCTACATAA 3675 0.4049 MEESNQNEIQIQIRTLTGESIILHITPSATVQHLKLLLNNSFPPATNSPNFHLFFKGNKLQLHDEIGSYIIQSGESLVLIPFAKKELTQSDKPDSVFSSPNVACNASTSNLADTMWSSIMEDLSELRETAEKIDDNNVSNLERNKERTAEVEIKRGLGSEKEIELPYHLIFNTLDCTNESALGESNCEVFSKVLDSVNCLSDLPLGHCKLFKRACLTKRTSGNDGGGVTCLCPPWLKTVVKSFAFVNIFSAFLHLQGRKVTTSLLEEGLDQFSKFGVKLGLHEMKHLSLLCPHLVSFVDDIEKASFGDVIIVVNHSTSNEDQIEDPKRARKSLYISKIVSTLKRRDSSFRKYLGWAFEQIQFEIGDEMNVRISFEELLAAVEDCDFTRKGNKSKRVKRSSTSSRPDMDHFGCHDTKSLMAVDMVEHLKKGIGSEGQIVHIEDICARKAIYSEIPAELSEKTRSALKYIGVSKMYNHQAESIQASLLGKNVVVATMTSSGKSLCYNLPVLEELFENSSSCALYIFPTKALAQDQLRSLLHMTKEFDVDLNIGIYDGDTSHSERTWLRDNSRLLITNPDMLHISILPHHRLFSRILSNLRFLVIDETHTYKGAFGCHTALILRRLRRLCSHVYGAVPSFIFSTATSANPHEHSMELANLPKVELFQKDGSPSARKLFILWNPVLRPKTIFNKARFAMDNDELADESANFVRSSPIVDVSRLLAEMVQHGLRCIAFCKSRKLCELVLSYAREILQETAPHLLDSICAYRGGYIAEERRKIESAFFGGKICGVAATNALELGIDVGEIDVTLHLGFPGSIASLWQQAGRGGRRARPSLAIYVAFGGPLDQYFMNNPRKLFERPIECCHIDSQNKQVLEQHLVCAAHEHPLSVQYDEQYFGACLESCLNSLKDRGYLCPDLSDSSRIWNYIGPEKLPSHAINIRAIETVRYSVIDQKKNEVLEEIEESKAFFQVYEGAVYLRQGKTYLVEKLDLSSKTAFCKEADLKYYTKTRDYTDIHVIGGNIAYPVIDSTMFTKTNVRANACQVATTWFGFYRIWRGSNQIIDAVDLALPQYSYESQAVWVPVPQSIKEAVVKQNYDFRGGLHAASHAVLHVVPLHIVCNLSDLAPECPNPHDSRYYPERILIYDQNPGGSGISVQAQPHFSKFLTAALEVLTCCRCSAEVGCPNCVQSFACHEYNEVLHKDAAIMIIKMQRTSTLRNVLVIFKST* 1225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g2335 1224 Pfam Helicase conserved C-terminal domain 719 828 IPR001650 -
Tpr2g2335 1224 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 520 847 IPR027417 -
Tpr2g2335 1224 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 715 873 IPR001650 -
Tpr2g2335 1224 CDD DEXHc_Hrq1-like 474 654 - -
Tpr2g2335 1224 Gene3D - 446 664 IPR027417 -
Tpr2g2335 1224 ProSiteProfiles Ubiquitin domain profile. 9 80 IPR000626 GO:0005515
Tpr2g2335 1224 SMART helicmild6 749 830 IPR001650 -
Tpr2g2335 1224 Pfam MrfA Zn-binding domain 1103 1185 IPR018973 -
Tpr2g2335 1224 Pfam DEAD/DEAH box helicase 475 644 IPR011545 GO:0003676|GO:0005524
Tpr2g2335 1224 Pfam Ubiquitin family 11 79 IPR000626 GO:0005515
Tpr2g2335 1224 Gene3D - 711 837 IPR027417 -
Tpr2g2335 1224 SMART ultradead3 469 675 IPR014001 -
Tpr2g2335 1224 CDD Ubl_ubiquitin_like 11 80 - -
Tpr2g2335 1224 SUPERFAMILY Ubiquitin-like 4 87 IPR029071 -
Tpr2g2335 1224 CDD SF2_C_Hrq 675 839 - -
Tpr2g2335 1224 Gene3D - 1 92 - -
Tpr2g2335 1224 PANTHER ATP-DEPENDENT HELICASE HRQ1 23 1208 - -
Tpr2g2335 1224 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 481 662 IPR014001 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g2335 477 861 Eukaryotic Initiation Factors Gene Family AT5G11200 21.928 2.74e-06 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g2335 - - cam:101511069 2075.06