Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g2326 ATGACAAACCAAAATGTGTTAGGAAAATCACGTTTGAATGAGAGGCTTATGGAGTTAGCAATGTCGATTTCAAACTCTAATGTTTTACCAAGAACTTCAGTACCAGAATTAATGGCTTGGTTTGATGGAATATTGGCTCAGCCCAAAAACAATTTCATTAAACCTTTGGAAGATAATAACGGCAAAGGAACAACAACTAAAGTTAACTCATGGATTGATTCCATGAGAGCTTCTTCTCCTGCACGAACCAAACACGGTTCTGAAAATCGGGACCAAACTCACTGGACCCTTTTCCATCCGTCGGCGTTAAACATGTTTAATCAAATAATGTACAATTCAAATGGGAAACAAATCGTAGTTTTTCTTGATTATGATGGAACTCTATCTCCAATTGTTACAGATCCAGATAGAGCTTTCATGAGTAAAAAGATGAGAGCGACTTTGAAGGATATAGCAAAGCATTTCCCCACAGCCATCGTTAGTGGAAGGTGTTTAGACAAGCTATTTAGCTTTGTAAGGTTGTCAGAATTATACTATGCTGGAAGTCATGGGATGGATATTAAGGGACCAACAAATAGGAGAAGCACTAAGAAAGGTAATAATGATGGGGTACTTTTGCAGCCTGCTAATGAATTCTTGCCCATGATAAATGAGGTTTATAAAATCTTGGTGGAAAAAACAAAGTGTGTTCCAGGGGCTATGGTGGAAAATAACAAGTTTTGTTTATCTGTACATTTTCGCCGTGTTGCCGAAAAGAGTTGGGCAGCATTGGCTGAACAAGTAAGCTTAGTGTTGAATGAGTACCCAAAGCTAAAGCTAACACAAGGGAGAAAAGTGTTGGAGATTCGACCAACCATTAAATGGGACAAGGGAAGGGCTCTTGAATTTTTATTAGAGTCACTTGGTTTTGCAAATTCTAACAACGTATTTCCAATTTATATTGGTGATGATCGAACTGACGAAGATGCTTTCAAGGTTTTAAGCAATAGGGGCCAAGGGAGTGGAATTCTTGTCTCTAAAATTCCAAAAGAAACCAACGCTTCATACACTTTGCAAGATCCATCTGAGGTTGGGGAATTTTTGCGGCATTTGGTGGATTGGAAAAGAACGAGTTCTCATTCTCACAAGTTGTAG 1134 0.3862 MTNQNVLGKSRLNERLMELAMSISNSNVLPRTSVPELMAWFDGILAQPKNNFIKPLEDNNGKGTTTKVNSWIDSMRASSPARTKHGSENRDQTHWTLFHPSALNMFNQIMYNSNGKQIVVFLDYDGTLSPIVTDPDRAFMSKKMRATLKDIAKHFPTAIVSGRCLDKLFSFVRLSELYYAGSHGMDIKGPTNRRSTKKGNNDGVLLQPANEFLPMINEVYKILVEKTKCVPGAMVENNKFCLSVHFRRVAEKSWAALAEQVSLVLNEYPKLKLTQGRKVLEIRPTIKWDKGRALEFLLESLGFANSNNVFPIYIGDDRTDEDAFKVLSNRGQGSGILVSKIPKETNASYTLQDPSEVGEFLRHLVDWKRTSSHSHKL* 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g2326 377 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 1 377 - -
Tpr2g2326 377 TIGRFAM HAD-SF-IIB: HAD hydrolase, family IIB 120 328 IPR006379 -
Tpr2g2326 377 CDD HAD_TPP 119 359 - -
Tpr2g2326 377 TIGRFAM T6PP: trehalose-phosphatase 116 365 IPR003337 GO:0003824|GO:0005992
Tpr2g2326 377 Pfam Trehalose-phosphatase 121 355 IPR003337 GO:0003824|GO:0005992
Tpr2g2326 377 Gene3D - 118 218 IPR023214 -
Tpr2g2326 377 Gene3D - 232 376 IPR023214 -
Tpr2g2326 377 SUPERFAMILY HAD-like 119 368 IPR036412 -
Tpr2g2326 377 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 1 377 IPR044651 GO:0004805|GO:0005992
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g2326 Tpr-Chr2 28056968 28060002 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g2326 115 376 Trehalose Biosynthesis Gene Families AT1G06410 26.071 3.16e-07 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g2326 K01087 - gmx:100792915 557.37
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g2326 2 28056968 28060002 Tpr2g2326 2 28056968 28060002 ECH