Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g2305 ATGATTCTATCAAGCTATAGGTTTGCTTTCTTTTTCAGCTTCAACTCTTCCTTTTTTTTAAGTGTATATATGAACTCTTCATCACTATCAACTGAACTAATCGCGCCGAAAAGGATGGACATATATGAGCCATTCCATCAATTGAGCATGTGGGAGGATAGCTTTAAAGTTGATCATAGCACCCTTAATTCAATTGCTTCACCAATGTTGAAGATGAACATTAGTAGCTTGGAGAACAAGTGTGAATATATTCCTCATGAATCAAGAGAGCCTTCTGGAGATGATCAAGAAACTACTGAAGAACCTGTTCCGAAGGTGCTAAGACGTCAAGCACAAAATCGCGAGGCTGCTAGGAAATGTCGATTGCGAAAGAAGGCTTATGTTCAACAATTGGAAACAAGTAGATTGAAGCTCATGCAATTGGAACTTGAGATTGAGAAAACAAGAAAACAGGGTTTGTACAGAAGCAATTCATTTGATGTCAGTTATATGAGATCATCTGGAATAATAAACTCAGGGATATCTTTATTTGAAATTGAATATGGACGTTGGATTGAAGAGCAAGATAGACAAAATGAAGAACTAAGAAATGCATTGCAAACTAATGCATCTGATATACAATTTCATCTACTTGTTGAGAGTAGCTTGAATCAATACTCAAATCTTTTTAGAATGAAAGCAGAAGCTGCAAAAGCTGATGTTTTCTATTTAATATCTGGCGCATGGAAATCATCGGTAGAACGCCTTTTTCTTTGGATTGGAGGATCTCGTCCGTCACAGATTCTAAATATCATCTTACCCAAGCTTGAGGCTTTAACTGATCAACAAATTGCGAGCATTAACAACCTACGATTATCCTCTCAGCAAGCTGAAGACGCTCTTTCAATAGGGTTGGAGAAACTCCAGCAAAGTATGATCCACAACATTCAAGCTGATCCCTTGGATTTTGGAAACTATGGATTTCAGATGGCTTCTGCCATGGACAAAGGAGAAGCAGTAGAAGGTTTTGTAATCCAGGCAGATCACCTTAGGCAGCAAGCTTTGTTGTACATGTCTCGTATCTTGACAATCGGGCAATCAGCTAGAGGCTTGCTGGCTATGGGGGAATACTTTCAACGTCTTCGCACTCTTAGTTCGTTGTGGACTGCTCGTTCATGTGATCATTTCTACCCTACTCAACACTCAAATTGA 1191 0.3896 MILSSYRFAFFFSFNSSFFLSVYMNSSSLSTELIAPKRMDIYEPFHQLSMWEDSFKVDHSTLNSIASPMLKMNISSLENKCEYIPHESREPSGDDQETTEEPVPKVLRRQAQNREAARKCRLRKKAYVQQLETSRLKLMQLELEIEKTRKQGLYRSNSFDVSYMRSSGIINSGISLFEIEYGRWIEEQDRQNEELRNALQTNASDIQFHLLVESSLNQYSNLFRMKAEAAKADVFYLISGAWKSSVERLFLWIGGSRPSQILNIILPKLEALTDQQIASINNLRLSSQQAEDALSIGLEKLQQSMIHNIQADPLDFGNYGFQMASAMDKGEAVEGFVIQADHLRQQALLYMSRILTIGQSARGLLAMGEYFQRLRTLSSLWTARSCDHFYPTQHSN* 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g2305 396 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 108 123 IPR004827 GO:0003700|GO:0006355
Tpr2g2305 396 PANTHER FACTOR TGA7, PUTATIVE-RELATED 39 388 - -
Tpr2g2305 396 Gene3D - 105 156 - -
Tpr2g2305 396 SUPERFAMILY Leucine zipper domain 107 138 IPR046347 GO:0003700|GO:0006355
Tpr2g2305 396 Pfam Seed dormancy control 193 266 IPR025422 GO:0006351|GO:0043565
Tpr2g2305 396 ProSiteProfiles DOG1 domain profile. 174 384 IPR025422 GO:0006351|GO:0043565
Tpr2g2305 396 Coils Coil 124 151 - -
Tpr2g2305 396 SMART brlzneu 101 165 IPR004827 GO:0003700|GO:0006355
Tpr2g2305 396 Coils Coil 185 205 - -
Tpr2g2305 396 PANTHER TRANSCRIPTION FACTOR TGA9 39 388 - -
Tpr2g2305 396 Pfam bZIP transcription factor 105 134 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g2305 Tpr-Chr2 27710942 27715536 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g2305 24 392 Calmodulin-binding Proteins AT5G65210 51.475 6.56e-124 361
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Tpr2g2305 DOG1 2.1e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g2305 K14431 - gmx:100775882 550.051