Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g2301 ATGAATCACATACCTCGAATTTTCGGTTATAGAAAGCAACAAACGGAAATGAACTCGAAGAAGAAGAAGACTCCAAGGAAACAACCGAAGTTGGAACGCCGTAATGCCACGAAGAATTTCAATTACGATGCTCAACCGTCGTCGCCGGAATCCACCGAGTCGGCGTCAATTCTCTGCACTCGATCGATGGATATATACGATAAAAAGAGCTTTCGAGTTGAAGGCATCGACGGTGAGTTTGACATCATTTGCCGGAGCCTTGGGCTTTCCGGACCGGAGGATTTCTCAATTCCGGCGGCGGCTTGGGAGGCAATGAAATTTCGGTCTTCGTCGGATGTTCTGCCGAGGCTGAATTCGTCAGATTTTGATATAACGAAGGTTAGCGAAGAAATCGGAGTTGTAGAGTCCGAAGATAGGGTTTCGATTAGAGATTCTCCTGCCGAAACTAGCGGTTGCTGTAACGCGGGCGATGGTGGTGGAAAAGATAGAGTTTCGATTAGGGTTTTTGACGATGTTAGCAGTAGCTGTACAAGCAGCGAAAATAGGGTTCCGATTACGGGTTTTGTTGAGACGAGTGCTTGCTCCACCGGTGGCGGCGGTGGTATCAAGGGAATTAGACCTCCGATGCTAAAGCCTCCGCCGGGTGTTAGAGTTTCTGTTGTAGACAGTACGTGTTCCACGTGGGATCTTCTGAGGGATTTCGCTCCGGAAGGGGAAGGAAAAGGAAAAGAGAGAGAAGTGGAAGAGAAGAAAGATGAAGAAGAAGAAGAAGAAGAAGAAGAGGAAGTTGGTGGAGTGAGATTGAAGATAGAAGAAGAGGTAACTGCTGAGATTATCGGTGAGTTTTCGAGGTCATGTTCGTTCACTACTTCACACGAAGATGATTCATCTAGCTTTACGACGGATACTAGGTCTAATAGTATATCTCCTAATGTGAGATTGATTTATGTTATTACTCCTGGTAGCTGGCAAAAGGGTGACCTTTTGGGGCGAGGTTCATTTGGATCTGTATATGAAGGAATTTCTGAAGATGGATTCTTTTTTGCTGTAAAACAAGTTTCACTGCTTGATCAAGGGAGTCAGGGAAAGCAAAGTGTCGTTCAACTGGAGCACGAAATTGAAGTTTTGAGTAAATTGGAACATGAGAATATAGTTCGATACATTGGCACTGAAATGGATGAATCAAATCTATATATCTTTATTGAGTTTGTAACCAAAGGTTCACTTTTAAGCCTCTACCGGAGATATAAACTTCGAGATTCCCAAGTATCTGCTTATACGAGACAGATTCTGCATGGTTTAAAGTATCTTCATGATCGCAATATTGTTCACAGGGATATTAAATGTGCAAATATATTGGTTGATGCAAATGGATCTGTCAAGGTTGCAGATTTTGGATTGGCTAAGGCAGTTAAATTGAATGATATTAAATCATGCCAGGGAACTGCATTCTGGATGGCACCAGAGGTTGTAAAAGGAAAAGTTAAAGGTTATGGACTTCCAGCTGATATATGGAGTCTAGGATGCACTGTGTTGGAGATGTTAACTGGGAAACTTCCATACGCTCCTTTGGAATGTATCAGCGCATTGTTTAAAATTGGAAAAGGTGAACTACCTCTGGTGCCTGATTCTCTTTCAAGAGATGCACGTGATTTCATCCTGCAGTGTCTTAGAGTTAATCCAGATGACCGTCCCACTGCGGCTCAACTCTTAGACCACAAATTTGTCCAGAGGTCATTCTCCCAGTCATCTGACTCTGCATCTCCACATATTCTGAGAAGAGGTTAA 1788 0.4329 MNHIPRIFGYRKQQTEMNSKKKKTPRKQPKLERRNATKNFNYDAQPSSPESTESASILCTRSMDIYDKKSFRVEGIDGEFDIICRSLGLSGPEDFSIPAAAWEAMKFRSSSDVLPRLNSSDFDITKVSEEIGVVESEDRVSIRDSPAETSGCCNAGDGGGKDRVSIRVFDDVSSSCTSSENRVPITGFVETSACSTGGGGGIKGIRPPMLKPPPGVRVSVVDSTCSTWDLLRDFAPEGEGKGKEREVEEKKDEEEEEEEEEEVGGVRLKIEEEVTAEIIGEFSRSCSFTTSHEDDSSSFTTDTRSNSISPNVRLIYVITPGSWQKGDLLGRGSFGSVYEGISEDGFFFAVKQVSLLDQGSQGKQSVVQLEHEIEVLSKLEHENIVRYIGTEMDESNLYIFIEFVTKGSLLSLYRRYKLRDSQVSAYTRQILHGLKYLHDRNIVHRDIKCANILVDANGSVKVADFGLAKAVKLNDIKSCQGTAFWMAPEVVKGKVKGYGLPADIWSLGCTVLEMLTGKLPYAPLECISALFKIGKGELPLVPDSLSRDARDFILQCLRVNPDDRPTAAQLLDHKFVQRSFSQSSDSASPHILRRG* 596
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g2301 595 Gene3D Transferase(Phosphotransferase) domain 1 322 592 - -
Tpr2g2301 595 PRINTS Tyrosine kinase catalytic domain signature 401 414 IPR001245 GO:0004672|GO:0006468
Tpr2g2301 595 PRINTS Tyrosine kinase catalytic domain signature 436 454 IPR001245 GO:0004672|GO:0006468
Tpr2g2301 595 PRINTS Tyrosine kinase catalytic domain signature 502 524 IPR001245 GO:0004672|GO:0006468
Tpr2g2301 595 PRINTS Tyrosine kinase catalytic domain signature 545 567 IPR001245 GO:0004672|GO:0006468
Tpr2g2301 595 Coils Coil 240 264 - -
Tpr2g2301 595 MobiDBLite consensus disorder prediction 38 55 - -
Tpr2g2301 595 PANTHER MAP KINASE KINASE KINASE-LIKE PROTEIN 65 589 - -
Tpr2g2301 595 SMART serkin_6 323 576 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr2g2301 595 MobiDBLite consensus disorder prediction 1 55 - -
Tpr2g2301 595 ProSitePatterns Serine/Threonine protein kinases active-site signature. 442 454 IPR008271 GO:0004672|GO:0006468
Tpr2g2301 595 ProSiteProfiles Protein kinase domain profile. 323 576 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr2g2301 595 SUPERFAMILY Protein kinase-like (PK-like) 299 580 IPR011009 -
Tpr2g2301 595 MobiDBLite consensus disorder prediction 234 249 - -
Tpr2g2301 595 MobiDBLite consensus disorder prediction 234 265 - -
Tpr2g2301 595 Pfam Protein kinase domain 324 576 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr2g2301 595 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 65 589 - -
Tpr2g2301 595 ProSitePatterns Protein kinases ATP-binding region signature. 329 351 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g2301 Tpr-Chr2 27626158 27634930 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g2301 6 580 MAP Kinase Kinase Kinase AT4G08500 50.654 9.51e-171 497
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Tpr2g2301 Pkinase 9.5e-68 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g2301 K13414 - gmx:100819177 692.189