Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g2300 ATGGCTGCTTCAGTTGACAACCGTCAGTTTCGTAACCTAAACGGCGTCGTTCGCCCATTCAATACCATCCACGACCTGAAACCGGGATTCCCGTTAAACATAGATTCATTCAGCAGCGACAACGAAGAAGAAGAAAACGACGACGCTTTAGATCTCCAAGAATTAATCCGAAAAACGAACGCGGAAGTCGAACCGTCAATTCTGGACCCACGCGATGAAGGAACGTTGGATAACTGGGTCACACGAAACGCTTCCATGGTCCGTCTCACAGGGAAACATCCTTTTAATTCAGAACCACCACTACCACGTCTGATGCACCACGGTTTCATAACACCAGTTCCAATCCACTACGTTAGAAACCACGGTGCTGTCCCAAAAGCACGTTGGGAAGATTGGACCGTTGAAGTAACCGGTCTAGTAAAAAACCCAACCCGGTTCACTATGGACCGACTCATCCGCGAGTTTCCAAGCCGTGAGTTTCCCGTTACATTAGTCTGCGCTGGTAACCGTCGAAAAGAACAAAACATGGTGAAACAAAGCGTTGGTTTTAATTGGGGTGCTGCAGCTGTTTCAAACTCCGTATGGCGCGGGGTATCTTTGCGTCACGTGCTTAAAAGGTGTGGGATTCACGTGCGTTCTAAAGGTGCGGTTCATGTTTGTTTTTATGGTGCTGAGGATTTACCGGGTGGTGGTGGGTCCAAATATGGAACTAGTATTAAGAGGGAATATGCGATGGATCCTTCGCGTGATGTTATACTTGCTTACATGCAGAATGGTGAGGCTTTGGCTCCGGATCATGGGTTTCCGGTTCGGGTTATTATACCCGGTTTTATTGGTGGACGTATGGTGAAATGGCTTAAACGTATTGTTGTTACTTCTGATGAATGTGATGGTCACTATCATTATAAGGATAATAGAGTACTTCCTTCCCATGTTGACGCAGAACAAGCCAACGAAGAAGGTTGGTGGTACAAGCCGGAATATATTATCAACGAGCTAAACATAAACTCGGTGATTACAACGCCGTGTCACGATGAGATCTTGCCTATAAACTCATGGACTACACAGAGACCTTATACACTGAAAGGTTATTCATATTCCGGGGGTGGAAGAAAGGTGACACGGGTTGAGGTAACAATGGATGGTGGAGAAACATGGCACGTATGCACATTGGATCATCCTGAAAAACCTACAAAATACGGGAAATATTGGTGCTGGTGCTTTTGGTCCTTAGAAGTAGAGGTACTCGACCTTCTTGGTACCAAAGAGATTGCTGTCCGTGCATGGGATGAGGCTCTAAACACCCAACCTGAAAACCTCATCTGGAATGTTATGGGTATGATGAACAATTGTTGGTTCAGGGTAAAAACAAACGTGTGCAGACCCCACAAAGGTGAAATTGGCATAGTGTTTGAACACCCAACACAACCAGGTAACCAATCAGGTGGTTGGATGGCAAAAGAAAGACACTTGGAAAGATCACAAGACACCAATCCAACTCTCAAAAAGAGTGTCTCTTCTCCTTTCATGAACACAACATCAAAAACATACTCCATCTCCGAAGTTAAAAAACATAAAACCCCTGATTCTGCTTGGATCATCGTCCACGGTCATGTCTACGATTGCACACGCTTCCTTAAAGACCATCCTGGTGGCTCCGATAGCATCCTCATCAATGCCGGTACTGATTGTACCGATGAATTCGAAGCTATCCACTCTGACAAAGCCAAAAAATTGCTAGAAGATTATCGAATCGGCGAGCTTGTTACTACTGGTTACGCTTCAGATTCATCCTCCCCAAATAACTCCTTTCATGGAAATTCTGAATTTAGCCATCTTGCTCCCATTAAAGAAATCATGGCTCTTAACCCACGTGAGAGAATCCCATGCAAACTCATTTCAAAAACATCAATTTCGCATGATGTAAGACTCTTCCGTTTTGCATTACCCTCGGACGATCAATTATTGGGATTACCCGTCGGAAAACACATTTTCTTATGTGTTACCGTAGAAGGAAAATTGATCATGCGAGCTTATACGCCAACAAGTAGCATTGATGAAATTGGATATTTTGATTTAGTTGTCAAAATTTACTTCAAAAATGTTCATCCAAAGTTTCCTAGTGGTGGTCTCATGTCTCAATATTTGGACTCACTTACCATTGGGTCCACATTGGAAGTAAAAGGCCCAGTGGGCCACATTGAATACCTTGGAAGAGGAAATTTTACGGTTCACGGGAAACAAAGGTTCGCCAAGAAGCTAACATTTTTAGCTGGTGGAACGGGGATTACACCCGTATATCAAGTCGCGAATGCAATTCTGAAAGATGCCAATGATCGAACTGAAATGTATGTTGTTTATGCGAATCGGACCGAGGATGATATATTGTTGAGGGAAGAGTTGGATGAATGGGCAAAGATTTATAGTGATAGGTTCAAAATTTGGTATGTTGTGGAAAATGCAAAAGAAGGGTGGGAATATAGTGTAGGGTTCATTACGGAGAGTATCATGAGGCAGCATGTTCCATTGGCTGGAGAGGATACTTTGGCTTTGGCTTGTGGGCCACCACCTATGATTCAGTTTGCAGTGCAGCCTAATTTGGAAAAAATGGGGTATGATATTAAGAAGGATTTGCTTGTGTTTTAG 2646 0.4365 MAASVDNRQFRNLNGVVRPFNTIHDLKPGFPLNIDSFSSDNEEEENDDALDLQELIRKTNAEVEPSILDPRDEGTLDNWVTRNASMVRLTGKHPFNSEPPLPRLMHHGFITPVPIHYVRNHGAVPKARWEDWTVEVTGLVKNPTRFTMDRLIREFPSREFPVTLVCAGNRRKEQNMVKQSVGFNWGAAAVSNSVWRGVSLRHVLKRCGIHVRSKGAVHVCFYGAEDLPGGGGSKYGTSIKREYAMDPSRDVILAYMQNGEALAPDHGFPVRVIIPGFIGGRMVKWLKRIVVTSDECDGHYHYKDNRVLPSHVDAEQANEEGWWYKPEYIINELNINSVITTPCHDEILPINSWTTQRPYTLKGYSYSGGGRKVTRVEVTMDGGETWHVCTLDHPEKPTKYGKYWCWCFWSLEVEVLDLLGTKEIAVRAWDEALNTQPENLIWNVMGMMNNCWFRVKTNVCRPHKGEIGIVFEHPTQPGNQSGGWMAKERHLERSQDTNPTLKKSVSSPFMNTTSKTYSISEVKKHKTPDSAWIIVHGHVYDCTRFLKDHPGGSDSILINAGTDCTDEFEAIHSDKAKKLLEDYRIGELVTTGYASDSSSPNNSFHGNSEFSHLAPIKEIMALNPRERIPCKLISKTSISHDVRLFRFALPSDDQLLGLPVGKHIFLCVTVEGKLIMRAYTPTSSIDEIGYFDLVVKIYFKNVHPKFPSGGLMSQYLDSLTIGSTLEVKGPVGHIEYLGRGNFTVHGKQRFAKKLTFLAGGTGITPVYQVANAILKDANDRTEMYVVYANRTEDDILLREELDEWAKIYSDRFKIWYVVENAKEGWEYSVGFITESIMRQHVPLAGEDTLALACGPPPMIQFAVQPNLEKMGYDIKKDLLVF* 882
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g2300 881 PANTHER NITRATE REDUCTASE [NADH] 2 43 881 - -
Tpr2g2300 881 Pfam Oxidoreductase NAD-binding domain 756 863 IPR001433 GO:0016491
Tpr2g2300 881 PRINTS Cytochrome B5 signature 539 549 IPR001199 -
Tpr2g2300 881 PRINTS Cytochrome B5 signature 549 563 IPR001199 -
Tpr2g2300 881 PRINTS Cytochrome B5 signature 564 571 IPR001199 -
Tpr2g2300 881 PRINTS Cytochrome B5 signature 576 588 IPR001199 -
Tpr2g2300 881 PANTHER NADH-CYTOCHROME B5 REDUCTASE 43 881 IPR001834 GO:0016491
Tpr2g2300 881 Gene3D - 732 881 IPR039261 -
Tpr2g2300 881 Gene3D - 332 507 - -
Tpr2g2300 881 SMART Cyt_b5_2 517 589 IPR001199 -
Tpr2g2300 881 PIRSF Nitr_rd_NADH 10 880 IPR012137 GO:0006809|GO:0042128|GO:0050464
Tpr2g2300 881 Pfam Oxidoreductase FAD-binding domain 630 736 IPR008333 -
Tpr2g2300 881 SUPERFAMILY Oxidoreductase molybdopterin-binding domain 69 330 IPR036374 -
Tpr2g2300 881 Pfam Cytochrome b5-like Heme/Steroid binding domain 520 588 IPR001199 -
Tpr2g2300 881 SUPERFAMILY E set domains 332 459 IPR014756 -
Tpr2g2300 881 SUPERFAMILY Riboflavin synthase domain-like 619 737 IPR017938 -
Tpr2g2300 881 Gene3D - 510 592 IPR036400 -
Tpr2g2300 881 Gene3D - 91 331 IPR036374 -
Tpr2g2300 881 Gene3D Translation factors 617 731 - -
Tpr2g2300 881 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 625 737 IPR017927 GO:0016491
Tpr2g2300 881 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 548 558 IPR001709 GO:0016491
Tpr2g2300 881 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 677 684 IPR001709 GO:0016491
Tpr2g2300 881 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 709 718 IPR001709 GO:0016491
Tpr2g2300 881 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 755 774 IPR001709 GO:0016491
Tpr2g2300 881 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 781 790 IPR001709 GO:0016491
Tpr2g2300 881 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 793 804 IPR001709 GO:0016491
Tpr2g2300 881 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 825 841 IPR001709 GO:0016491
Tpr2g2300 881 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 849 857 IPR001709 GO:0016491
Tpr2g2300 881 PRINTS Eukaryotic molybdopterin domain signature 87 101 IPR008335 GO:0016491
Tpr2g2300 881 PRINTS Eukaryotic molybdopterin domain signature 109 125 IPR008335 GO:0016491
Tpr2g2300 881 PRINTS Eukaryotic molybdopterin domain signature 162 173 IPR008335 GO:0016491
Tpr2g2300 881 PRINTS Eukaryotic molybdopterin domain signature 173 185 IPR008335 GO:0016491
Tpr2g2300 881 PRINTS Eukaryotic molybdopterin domain signature 188 203 IPR008335 GO:0016491
Tpr2g2300 881 PRINTS Eukaryotic molybdopterin domain signature 246 262 IPR008335 GO:0016491
Tpr2g2300 881 PRINTS Eukaryotic molybdopterin domain signature 263 276 IPR008335 GO:0016491
Tpr2g2300 881 PRINTS Eukaryotic molybdopterin domain signature 279 292 IPR008335 GO:0016491
Tpr2g2300 881 PRINTS Eukaryotic molybdopterin domain signature 330 342 IPR008335 GO:0016491
Tpr2g2300 881 PRINTS Eukaryotic molybdopterin domain signature 361 375 IPR008335 GO:0016491
Tpr2g2300 881 PRINTS Eukaryotic molybdopterin domain signature 375 387 IPR008335 GO:0016491
Tpr2g2300 881 PRINTS Eukaryotic molybdopterin domain signature 402 412 IPR008335 GO:0016491
Tpr2g2300 881 PRINTS Eukaryotic molybdopterin domain signature 427 439 IPR008335 GO:0016491
Tpr2g2300 881 PRINTS Eukaryotic molybdopterin domain signature 440 453 IPR008335 GO:0016491
Tpr2g2300 881 ProSiteProfiles Cytochrome b5 family, heme-binding domain profile. 514 589 IPR001199 -
Tpr2g2300 881 Pfam Mo-co oxidoreductase dimerisation domain 328 459 IPR005066 GO:0016491|GO:0030151
Tpr2g2300 881 CDD cyt_b5_reduct_like 630 881 - -
Tpr2g2300 881 Pfam Oxidoreductase molybdopterin binding domain 121 300 IPR000572 -
Tpr2g2300 881 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 724 873 IPR039261 -
Tpr2g2300 881 CDD eukary_NR_Moco 72 457 - -
Tpr2g2300 881 ProSitePatterns Cytochrome b5 family, heme-binding domain signature. 545 552 IPR018506 GO:0020037
Tpr2g2300 881 PRINTS Cytochrome B5 reductase signature 656 667 - -
Tpr2g2300 881 PRINTS Cytochrome B5 reductase signature 677 684 - -
Tpr2g2300 881 PRINTS Cytochrome B5 reductase signature 722 736 - -
Tpr2g2300 881 PRINTS Cytochrome B5 reductase signature 755 774 - -
Tpr2g2300 881 PRINTS Cytochrome B5 reductase signature 793 804 - -
Tpr2g2300 881 PRINTS Cytochrome B5 reductase signature 849 857 - -
Tpr2g2300 881 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 512 592 IPR036400 -
Tpr2g2300 881 ProSitePatterns Eukaryotic molybdopterin oxidoreductases signature. 138 173 IPR022407 GO:0043546
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g2300 Tpr-Chr2 27611146 27616928 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g2300 617 872 NADPH P450 reductases AT5G17770 38.760 1.12e-51 181
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g2300 K10534 - gmx:100813471 1509.97
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g2300 2 27611146 27616928 Tpr2g2300 2 27611146 27616928 ECH