Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g2285 ATGGAGATGGACATAGACATGGTCATGGATGTTGTCCCTGATTTCCTTGAATTCTCCAATTACAGTAACACTACGACCACCCCCACTTCCGATGAAGACATCACCTTGTCCCCTCTCCTCGATTTAGATTTCTTCACCACAAACCAAGATGATTTCCATGACTTCATTGATGCACTCACCAACGATGAAATCATAACCGTTGATCCAAATCTAGACAAAATGGTCGTTGAGCAAGATGAAGAAGAAGGATCCATGGGAGACATGTCCAACTCCAATTCCACTACAGATGAAGACACTGACGACGACGATAGAAAGGGCCTCCGTCTTGTGCACCTCCTTATGGCGGCGGCGGAGGCCTTAACAGGCACAAACAAGAGCCACAATCTGGCTCAAGTGATATTGATTCGGCTCAAAGACTTAGTGTCTTCCACTCATGGCACCAACATGGAGAGACTCGCCGCGTATTTTACCGACGCCCTCCAAACTCTACTAAACGGCGCTGATACTGGTACCACCGCCAACAACCACCACAACAAACTTTGCTTACTCACTGGACCACACCAAACAGATTTACTCTCAGCCTTTCAGCTTCTTCAAGACATGTCTCCTTACGTCAAGTTCGCTCACTTCACAGCTAATCAAGCCATCCTTGAAGCCGTTACTCATGATAGAAGAGTTCACATAGTTGACTATGATATCATGGAAGGGGCCCAATGGGCTTCATTAATTCAATCACTTTCATCACGTAAAGAAGGCCTGCCGGGCCCACATCTTCGCATCACTGCATTGTCCAGAAACAAAGAACGTGGCAGTGGACGTAGATCAACCACTGCCACTGTTCAAGAAACTGGACGACGACTAACGTCGTTTGCAGCTTCTGTTGGACAACCGTTTACTTTTCATCAATGTAGGTTGGATTCAGACGAAATGTTTCGAGCTGCTACGTTGAAGCTTGTTCGTGGCGAGGCTTTGGTGTTTAACTGTGTGATGCATTTACCACATCTTAGTTACCGTGCCTCCGATTCTATTGCTTCGTTTTTCAATGGTGCGAAAGAATTGGAATCAAAACTTGTGACATTAGTTGAAGAGGAGGTGGGTCCCACTAGTGATGGAGGCTTTGTGGGATTGTTTATGGATTCTTTGCACCGTTATTCAGCTATGTATGATTCACTTGAGGCTGGATTTCCTATGAATAAATGGGCTAGGAGTTTAGTTGAACAAGTGTTTTTGGGCCCAAGAATAATGGGCTCAGTGGCCCAATTATACATGAATGGTGAAGAGGAGGGGCAAGTGAGGGGTTCTTGGGGGGAGTGGTTGGGTGCGGAAGGGTTCAAGGGAGTTACCATAAGCTATGGTAATCATTGTCAATCAAAGTTGTTATTGGGTCTATTTAACGATGGTTATAGGGTGGAGGAAATGAGTAACAATAAGTTGGTGTTGGGTTGGAAATCAAGGCGTTTGCTTTCGGCTTCTATTTGGACTTGTATGTCAAAGTCGGAATATGATTTTTAG 1512 0.4517 MEMDIDMVMDVVPDFLEFSNYSNTTTTPTSDEDITLSPLLDLDFFTTNQDDFHDFIDALTNDEIITVDPNLDKMVVEQDEEEGSMGDMSNSNSTTDEDTDDDDRKGLRLVHLLMAAAEALTGTNKSHNLAQVILIRLKDLVSSTHGTNMERLAAYFTDALQTLLNGADTGTTANNHHNKLCLLTGPHQTDLLSAFQLLQDMSPYVKFAHFTANQAILEAVTHDRRVHIVDYDIMEGAQWASLIQSLSSRKEGLPGPHLRITALSRNKERGSGRRSTTATVQETGRRLTSFAASVGQPFTFHQCRLDSDEMFRAATLKLVRGEALVFNCVMHLPHLSYRASDSIASFFNGAKELESKLVTLVEEEVGPTSDGGFVGLFMDSLHRYSAMYDSLEAGFPMNKWARSLVEQVFLGPRIMGSVAQLYMNGEEEGQVRGSWGEWLGAEGFKGVTISYGNHCQSKLLLGLFNDGYRVEEMSNNKLVLGWKSRRLLSASIWTCMSKSEYDF* 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g2285 503 MobiDBLite consensus disorder prediction 78 102 - -
Tpr2g2285 503 PANTHER SCARECROW-LIKE PROTEIN 26 5 495 IPR030028 -
Tpr2g2285 503 ProSiteProfiles GRAS family profile. 100 494 IPR005202 -
Tpr2g2285 503 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 5 495 IPR005202 -
Tpr2g2285 503 Pfam GRAS domain family 109 494 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g2285 Tpr-Chr2 27381902 27386486 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g2285 103 497 GRAS Transcription Factor Family AT3G54220 36.683 3.96e-54 191
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Tpr2g2285 GRAS 2.1e-98 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g2285 - - cit:102620887 590.112
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g2285 2 27381902 27386486 Tpr2g2285 2 27381902 27386486 ECH