Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g2282 ATGGTTAAGACAGAGATCAACAAAATCAACAAAGAAAAATCAAAGGCAATGCAACAAAAAACATCATCATCATCATCATCATCATCTTCATCTTCATCATCAGCAAGAAATGCATCAAATGAGATGAAGAAGAAATACAAAGGAGTTAGAATGAGGAGTTGGGGTTCTTGGGTTTCAGAAATTAGAGCACCAAATCAAAAAACAAGAATATGGTTAGGTTCATATTCAACTGCAGAAGCTGCAGCTAGAGCTTATGATGCAGCACTTTTATGCCTTAAAGGTTCATCTGCATCAAATCTTAATTTCCCTTTAGAAATTTCTTCACATTTCATTCCTCAAGATAACACTGCTATGTCACCTAAATCAATTCAAAGAGTAGCTGCTTCTGCAGCAGCAGCAACTGCAAGTGCTGTTAGTAACAATGATATTGCTATTAACACCCCACCACTTTCTCCTCCTCCTAATCATGCTTCAACAACAACAACAACAACTTCATCTTCAATTGTTTCTTCTCCATCAATGTCATCTTCTCCTTCTGATCAAATTGATGATGATGTTTCACTTTTTTCTTCTTTTGGGCTCCACTCTAGCTGTGGTGGTGATTATCAAGCAAATGAATCAATGGCTATGATGGATTCTTGGTATGGTTTTGATGATTTACAATCACCAAAACATGTTGATCAAATGATGCTAAATGGTGCTTTGTTTGATTTTGATTCAACTCAAGTTCTTCTTGATGATTGGTATGAAGAAGGTGACATTAGTTTGTGGATGATAGTTCTTCAAGTTATTATTACTGACTGTGACAAAATTAAGATTATATATACTCTAGAAGATATTCATAAAGAGAAAAGACAATTTTTGGTCTCTCTTTTGTGA 879 0.3481 MVKTEINKINKEKSKAMQQKTSSSSSSSSSSSSSARNASNEMKKKYKGVRMRSWGSWVSEIRAPNQKTRIWLGSYSTAEAAARAYDAALLCLKGSSASNLNFPLEISSHFIPQDNTAMSPKSIQRVAASAAAATASAVSNNDIAINTPPLSPPPNHASTTTTTTSSSIVSSPSMSSSPSDQIDDDVSLFSSFGLHSSCGGDYQANESMAMMDSWYGFDDLQSPKHVDQMMLNGALFDFDSTQVLLDDWYEEGDISLWMIVLQVIITDCDKIKIIYTLEDIHKEKRQFLVSLL* 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g2282 292 MobiDBLite consensus disorder prediction 148 176 - -
Tpr2g2282 292 SUPERFAMILY DNA-binding domain 45 105 IPR016177 GO:0003677
Tpr2g2282 292 MobiDBLite consensus disorder prediction 1 47 - -
Tpr2g2282 292 MobiDBLite consensus disorder prediction 1 15 - -
Tpr2g2282 292 CDD AP2 44 103 IPR001471 GO:0003700|GO:0006355
Tpr2g2282 292 Gene3D AP2/ERF domain 44 105 IPR036955 GO:0003700|GO:0006355
Tpr2g2282 292 ProSiteProfiles AP2/ERF domain profile. 45 103 IPR001471 GO:0003700|GO:0006355
Tpr2g2282 292 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF014 22 258 - -
Tpr2g2282 292 Pfam AP2 domain 45 94 IPR001471 GO:0003700|GO:0006355
Tpr2g2282 292 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 22 258 - -
Tpr2g2282 292 PRINTS Ethylene responsive element binding protein signature 46 57 IPR001471 GO:0003700|GO:0006355
Tpr2g2282 292 PRINTS Ethylene responsive element binding protein signature 68 84 IPR001471 GO:0003700|GO:0006355
Tpr2g2282 292 MobiDBLite consensus disorder prediction 16 39 - -
Tpr2g2282 292 MobiDBLite consensus disorder prediction 156 176 - -
Tpr2g2282 292 SMART rav1_2 45 109 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g2282 Tpr-Chr2 27329267 27330597 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g2282 46 257 AP2-EREBP Transcription Factor Family AT1G21910 47.321 3.33e-44 148
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Tpr2g2282 AP2 7e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g2282 - - mtr:MTR_5g058470 309.301
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g2282 2 27329267 27330597 Tpr2g2282 2 27329267 27330597 ECH