Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g2253 ATGTCCGCACAAACCCCTACTTCTCTCACACTCTTTTCAGTCTCTAATATTCAATTTCATCACTATTATAGGACTAGTATTATTTATTTTCTTTTTCTTTTTTCCTCAAAAATTCCTTATATAAATAGAAATAGACCCAACACATCCAACACCACCTTAACATCAAACAAACCCATTCCATCCCCTATACAAACTTATCTCCTCATTTTGCACTTCCATTTCCTTATCATATTCTTCTCAAAAACACACACAAGAAAGAAAGAAAAAAAAAACAAAAACACTCTCATGGAAGATCAAATCCACAACAACACTAAAAGAATAAACACCACGTGTTTAAAATTATTTGGTTTCAGCGTCCATGAAGAAAACGATGAAGAATCATCAGCACCGGCACCACCACCAGCACACGAAGATATAACCGGAAACACTTCACCGTCCGGTTCGACAGAGTCCATCAGCGGAGACGGTGGAGCTTCAAGTTTAAATCCATCCTCCGGTGACCGGAAATACGAGTGTCAATATTGCTGTAGAGAATTTGCAAATTCACAAGCACTTGGTGGACACCAAAACGCACACAAAAAAGAGCGCCAACAACTCAAAAGAGCACAGTTACAAGCTTCACGAAACGCTGCCGTTTCGTTTGTTAGAAATCCGATTATCTCCGCTTTTGCACCGCCGCATCATCTGCTTACTTCGCCGGGACAAGTTATGATGCCGACTGCTCCTCCGTCATGGATTTACATGCCGCCTCGTTCGGCTCCTCCTCCTTTCCACGTGTCAGTTTCACACGGTTGTGCTTTTCCGTCTCCAAATAACGGTATGAGTAACTGTAACGGTGGTGGTGGTGGTGGTGGTGGTAACAGTTATAGCTTTATAACAGGTGCAAGATCCGCGAGTGCAGGTGTGTTACCGTGTGTGAGTGGAGTAGGGGATTGCTTACCCACATTGTCGACTATGGGCTCACAAGTACAGAGTCTGGCCCAGTTTGGGAAACTTGATGGGCCATCTTTGAGTAGGTTCTCTAAAGCAGATGTAGGGCCCAACTTTGATGATGGATTTGGTTTGGATTTGCATCTTAGCCTATCCCCACCATGA 1095 0.4338 MSAQTPTSLTLFSVSNIQFHHYYRTSIIYFLFLFSSKIPYINRNRPNTSNTTLTSNKPIPSPIQTYLLILHFHFLIIFFSKTHTRKKEKKNKNTLMEDQIHNNTKRINTTCLKLFGFSVHEENDEESSAPAPPPAHEDITGNTSPSGSTESISGDGGASSLNPSSGDRKYECQYCCREFANSQALGGHQNAHKKERQQLKRAQLQASRNAAVSFVRNPIISAFAPPHHLLTSPGQVMMPTAPPSWIYMPPRSAPPPFHVSVSHGCAFPSPNNGMSNCNGGGGGGGGNSYSFITGARSASAGVLPCVSGVGDCLPTLSTMGSQVQSLAQFGKLDGPSLSRFSKADVGPNFDDGFGLDLHLSLSPP* 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g2253 364 MobiDBLite consensus disorder prediction 139 164 - -
Tpr2g2253 364 MobiDBLite consensus disorder prediction 122 164 - -
Tpr2g2253 364 ProSitePatterns Zinc finger C2H2 type domain signature. 172 192 IPR013087 -
Tpr2g2253 364 SUPERFAMILY beta-beta-alpha zinc fingers 166 197 IPR036236 -
Tpr2g2253 364 PANTHER ZINC FINGER PROTEIN GIS3 96 363 - -
Tpr2g2253 364 Gene3D Classic Zinc Finger 150 217 - -
Tpr2g2253 364 PANTHER ZINC FINGER PROTEIN 5 96 363 IPR044299 GO:0010090
Tpr2g2253 364 ProSiteProfiles Zinc finger C2H2 type domain profile. 170 197 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g2253 Tpr-Chr2 26978687 26980173 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g2253 104 363 C2H2 Transcription Factor Family AT1G68360 43.123 4.86e-50 166
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g2253 - - gmx:102663095 308.916