Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g2236 ATGCAAAGCTTCAAAACAGCTCAATCAAACTCTCAACTCTATTGTCACCAACCCTTCTTACTTCGGGGAGAGGATATAAACAGAAACCAAATGCGTTTTTCTGATCTTGGAGACTTTCATCATTCTTCTCCTTTCTTTCAACAACAAGATGCTGTTGATTTAAGTTCAAGTTGTATGTTTAGTAGTGTAAAGTCGAACAATGTTGTTATTGGTGGTAATAACATGCAGTATGAAACAACAATCAACACGAATATTGGGTCTGCAGAGATAGCTTCAAATGGCGCAGGGTGTTCGGATGCAGGGCAGCAGCAACTGATGTACAACAAGGGAATAGCCTCCTTGCCTTTGGGGGTTGAGAATTGGGCTGATTCTGGAATGGCAGATAATAGCCAACAGACTGATGATACTTCCACTGATATTGATACTGATGATAAAAACCAATCCAATAGAGGCAAGAGTGAGGCGCATATGGTTGCTAACTCCAGGGATCAAACCAAGTTCAGAGCTGAAGATCACAAGACCCTTCGTAGACTTGCTCAGAATCGTGAGGCGGCTAGGAAGAGCCGGTTACGGAAGAAGGCATATGTACAGCAGCTGGAGAGCAGCCGAGTCAAGCTTATGCAATTAGAGCAAGAGCTTCAACGAGCACGTCAACAGGGCTTGTATCTTGCGAATCCTGGAGATCAAGGTCATTCAACTGTTGGAAATGGTGCCATGGCATTTGACATGGACTATGCTCACTGGGTTGATGAGCATCAACGTCTTCTGAACGATCTAAGATCGGCGTTAAATTCTCAAATGGGTGATAATGAATTGCATCTTCTTGTTGATGGTGTTATGGCACATTATAATGAATTATTTAGGCTAAAGAGCATAGGGGCAAAGGCGGATATATTTCACATGCTTTATGGGCAGTGGAAGACACCGGTTGAAAGATTTTTTATTTGGCATGGTGCATTCCGTTCATCCGAACTTCTCGAGATAGTCAGGAACCACCTCGAGCCATTAACCGAAAATCAGTTGATGGGAATTTGTACTCTGCAGAAGTCTACTCAGCAGACTGAAGATGCTTTATCTCAAGGAATGGAAGCATTGAAACAATCTCTTTTAGAGACACTTTCCTCTACCTCTTCATTACCTAGTACTGGTTCTGGAAATGTAGCTGATTACATGGGCCAGATGGCATTTGCAATGAGCAAGCTTGCATCGATCGAGGAATTCCTTCGTCAGGCTGACCTCCTGAAGCAAAAAACTCTACAACAGTTACAAAGGATTTTGACGACACGTCAGATTGCTCGGGCACTCCTTGTCAGAAATGATTACATTTCAAGACTACGAGCACTTAGCTCGTTATGGTTAGCCCGTCCAAGGGATTAG 1377 0.4321 MQSFKTAQSNSQLYCHQPFLLRGEDINRNQMRFSDLGDFHHSSPFFQQQDAVDLSSSCMFSSVKSNNVVIGGNNMQYETTINTNIGSAEIASNGAGCSDAGQQQLMYNKGIASLPLGVENWADSGMADNSQQTDDTSTDIDTDDKNQSNRGKSEAHMVANSRDQTKFRAEDHKTLRRLAQNREAARKSRLRKKAYVQQLESSRVKLMQLEQELQRARQQGLYLANPGDQGHSTVGNGAMAFDMDYAHWVDEHQRLLNDLRSALNSQMGDNELHLLVDGVMAHYNELFRLKSIGAKADIFHMLYGQWKTPVERFFIWHGAFRSSELLEIVRNHLEPLTENQLMGICTLQKSTQQTEDALSQGMEALKQSLLETLSSTSSLPSTGSGNVADYMGQMAFAMSKLASIEEFLRQADLLKQKTLQQLQRILTTRQIARALLVRNDYISRLRALSSLWLARPRD* 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g2236 458 MobiDBLite consensus disorder prediction 127 162 - -
Tpr2g2236 458 CDD bZIP_HBP1b-like 173 224 - -
Tpr2g2236 458 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 171 215 IPR004827 GO:0003700|GO:0006355
Tpr2g2236 458 ProSiteProfiles DOG1 domain profile. 238 455 IPR025422 GO:0006351|GO:0043565
Tpr2g2236 458 Gene3D - 172 224 - -
Tpr2g2236 458 SMART brlzneu 169 232 IPR004827 GO:0003700|GO:0006355
Tpr2g2236 458 SUPERFAMILY Leucine zipper domain 173 216 IPR046347 GO:0003700|GO:0006355
Tpr2g2236 458 Pfam Seed dormancy control 256 330 IPR025422 GO:0006351|GO:0043565
Tpr2g2236 458 Pfam bZIP transcription factor 172 208 IPR004827 GO:0003700|GO:0006355
Tpr2g2236 458 PANTHER TRANSCRIPTION FACTOR TGA9 38 458 - -
Tpr2g2236 458 MobiDBLite consensus disorder prediction 138 162 - -
Tpr2g2236 458 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 176 191 IPR004827 GO:0003700|GO:0006355
Tpr2g2236 458 Coils Coil 192 219 - -
Tpr2g2236 458 PANTHER BZIP FAMILY TRANSCRIPTION FACTOR 38 458 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g2236 Tpr-Chr2 26811125 26816068 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g2236 3 458 bZIP Transcription Factor Family AT1G68640 54.123 9.10e-153 440
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Tpr2g2236 DOG1 2.3e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g2236 K14431 - gmx:100797393 603.979