Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g2229 ATGCAATTCAACCACAAAATGGGATTTCATGACTACATCCAAGCACTTCAGGAAGAAAAGAAGAAAATCCAAGTTTTCCCAAGAGACCTTCCTCTTTCTCTCGAACTTGTTACTCAAGCCATTGAAAACTGTAAGCAACAATTGTCTGGAATAACAACAGAGTACAATTTGAATGGAGAAACAGAGTGTTCAGAGCAGACATCGATGGAAGAAGGTCGTGTTTTAGAGGAGTTTATTCCTATCAAGAAAAGAGCGTTAACACCTGATTATGATGAAGATGATGATGATTATGATGAGCAACATTCATCACGTAAGATGAAATCTGATTGGCTAACATCCGTTCAGTTGTGGAATCCCAGTCCACCACCTGCTAAAGAGGAAGTGCCTAGGAAAACAAATGTTGTGGAAGTGAAGAGAAGTGGTGGTGCATTTCATCCATTTCACAGAGAGGAAATTGCTGCGGAAAAGGGTAATGCATCAGAAGCTTGTAAAGAATCAACCACTTCACCACAAGTACCTGCTACAAGTTCTACTGAACCGGTTGTCGGAACCAGTAGCAAAAGAGATGATAAAGGACAGAGGAAGCAGCGTCGGTGCTGGTCACAGGAATTGCATAAGTGCTTCTTGCACGCTCTTCAACAACTCGGCGGTTCAGACACTGCCACGCCAAAACAGATAAGAGAACTAATGAAAGTTGATGGCCTCACCAACGACGAAGTTAAAAGTCATTTGCAGAAATTTCGTCTGCACACAAGGAGGAGTCCGGTAATTCACAACAATGCGAATACACAATCAACTCCTATGTTCCTGGTGGGGAACATTTATGTTCAACCACAAGTAGCTACCACCACAACAGTGTCAGGGGAATCAGCCAAAATTACTACTCCAACTGGAATTTATGCACCTGTGGCTATACATCCTCCAACTACAACCACAGTTATAAAGCCAAAGTTTCAGAAATTAGAGTTGAGTGAAAATTCAAATTCTGAAGAAAGGACTAATCATAGTGAAGGAATTATTGTTCATTCTAACTCCCCTGCATCATCATCTTCCACTCATAACATAACCGCTTCACCTCATTGTTGA 1086 0.4144 MQFNHKMGFHDYIQALQEEKKKIQVFPRDLPLSLELVTQAIENCKQQLSGITTEYNLNGETECSEQTSMEEGRVLEEFIPIKKRALTPDYDEDDDDYDEQHSSRKMKSDWLTSVQLWNPSPPPAKEEVPRKTNVVEVKRSGGAFHPFHREEIAAEKGNASEACKESTTSPQVPATSSTEPVVGTSSKRDDKGQRKQRRCWSQELHKCFLHALQQLGGSDTATPKQIRELMKVDGLTNDEVKSHLQKFRLHTRRSPVIHNNANTQSTPMFLVGNIYVQPQVATTTTVSGESAKITTPTGIYAPVAIHPPTTTTVIKPKFQKLELSENSNSEERTNHSEGIIVHSNSPASSSSTHNITASPHC* 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g2229 361 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 195 250 IPR006447 GO:0003677
Tpr2g2229 361 MobiDBLite consensus disorder prediction 323 361 - -
Tpr2g2229 361 PANTHER MYB-LIKE TRANSCRIPTION FACTOR FAMILY PROTEIN 6 357 - -
Tpr2g2229 361 MobiDBLite consensus disorder prediction 338 361 - -
Tpr2g2229 361 SUPERFAMILY Homeodomain-like 193 253 IPR009057 -
Tpr2g2229 361 Gene3D - 194 252 - -
Tpr2g2229 361 MobiDBLite consensus disorder prediction 161 183 - -
Tpr2g2229 361 MobiDBLite consensus disorder prediction 86 106 - -
Tpr2g2229 361 MobiDBLite consensus disorder prediction 156 196 - -
Tpr2g2229 361 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 6 357 IPR044787 GO:0003700|GO:0006355
Tpr2g2229 361 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 192 252 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g2229 Tpr-Chr2 26737846 26740978 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g2229 1 305 G2-like Transcription Factor Family AT1G68670 46.988 4.17e-75 234
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Tpr2g2229 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g2229 - - gmx:100819750 426.402