Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g2222 ATGAAGGCTGTATTTGATCCCATAAAAATGAAGGATGTGACTACAAAAAATGGAGAATCAAGTCAACAAGAGAGTGTTGATAAGTCTGAGGTTTTAAGGAACTCAAATTCCTCAAAAAACAACAAAAGAAAACTTGAAGATAATATTTTTGACAATGATGAAGATGAGGAAGCTATATTTGTTTCACAGACAAAGTCAAAAGGGATAGCTATTAAGTTGGATAATACAGTGATCAAGGAACAAAATTCAAACACATGTCACCAGTGCATGAAAAAGGATATGCTATCATTTGCATCTTGTACAAAATGTAACAAATCATATTGTTTCAGGTGCATCAGAAAATGGTACCCCAATTTAACATTCAAAGATATTGTAGAAAGGTGCCCCTGGTGCTGTAAGAATTGCAACTGCAATGTTTGCTTATCTTCAAGAGGAATGATCGAGACATCTAAGAGGAACGTCACAGATGGTGAAAAAGTTCATCATCTCCAATATATGCTCAAATTACTACTTCCATTTGTTCAACAAATTTGTGAAGAACAAAATCAAGAACAAGAGATTGAAGCTCAAATACAAGGAAAATCATGTTTTGAGATTGAGATACCACAAACTCAATGTGATGTTGGTGAACGTGTCTATTGTGACCATTGTGCTACTTCGATTGTTGACCTTCATAGAAGTTGTGCCAAATGCTCGTTTGAACTTTGCCTCAGTTGCTGTAAAGAGATACGCAATGGAAGCGTTAAACCACGCTCTGAAATGAAGGCTCAATACATAGATAGAGGTTATAGTTACATGCACGGCGGTGACCCTGATCTTCTACAAATGTTTTCTAATGCAAGTAATATTGTAGAGCGTCATGTTCAAATGTTCACTAGATGGAATGCAAATGATGATGGAAATATTAAATGTGCTCCAAAACAACTTGGAGGTTGTGGTGGATGCGTGTTGGAGCTCAAACGCATGCTTCCAAGTGAGAGAGTACCCGATTTGATAAACAAAGCACACCATCTACTAAAGCGTTTTTGCAATATTGAAGATGAAGTGAATGTCGATGAAGATCTATTTGAATTCCAAAAACATTGGAGGAATGGTGAGCCAGCTATTGTCGAGGGTGTTCTTAGACAAGGAACGGGTCTTAGTTGGGATCCAATGGTTGCTTTTAAAGCATTGTCTGGAAATTTGCCATCCGGTGACAACTCAAATGATACAGTTACAGTTGTTGATTGCTTGTCTGGCTGCGAGGAAGAAATGAACACTCACCAGTTCTTGGAAGGTTATAAAGATGGACAAAAATATATAAACTTATGGCCAACGTTGCTCAAGATAAAAGATTGGCCTCCTTCTGACAATTTTGAAAATGTTTTGCCGCGACATTTTGACGAGTTTATTCGTTGCTTGCCGTTTCAAGAGTATTGTGATCCTCGAGCCGGAATCCTTAACCTTGCTTCCAAGTTACCCCCACATGTGATAAAGCCTGACTTGGGTCCAAAAACGTATATTGCTTATGGAATCAAAGAAGAACTTGGAAGAGGAGATTCAGTTACAAAACTTCACTGTGATATGGCAGACGCGGTGAATATTTTGACTCATACAACTGAGGTGAAATTAACTGATGACCAATATTCTGCTATTAGAAAAATAAAAAGAGCACATCAAGCTCAAGATAAGAAAGAGGGTCTTGCTAAAAAGAATAGAGGCCCTTCTAAGAGTGATGAAAAATCTATCACAGAAGAAACAACAGAAATAGGTGGTGCTCTTTGGGACATATTCAGAAGAGAAGATACCAAATATTTAGAAGCATATCTAAGAAAACACTCCAATGAATTTAGGCATCTTTACTGTTCTCAGGTGAAAGAGGTTATTCATCCAATTCATGACCAATGTTTTTATTTGACTTCGGAGCATAAGAAGAAGTTAAAGGAAGAGTTTGGAGTAGAACCTTGGACATTTGAGCAGAAACTTGGTGAAGCAGTATTTATACCTGCTGGATGTCCACACCAAGTTAGAAATCTCAAGTCATGCACAAAAGTTGCTGTAGATTTTGTGTCACCAGAAAATGTGCATATGTGCATGCATTTAACCGAAGAGTTTCGCGGTCTTCCTAAGAATCATAAGGCAAGAGAAGACAAACTTGAGATTAAGAAGATGATACTCTATTCTGTTGATCAAGTTGTTAAAGAATTAGAAGCATTCATTTGA 2202 0.3733 MKAVFDPIKMKDVTTKNGESSQQESVDKSEVLRNSNSSKNNKRKLEDNIFDNDEDEEAIFVSQTKSKGIAIKLDNTVIKEQNSNTCHQCMKKDMLSFASCTKCNKSYCFRCIRKWYPNLTFKDIVERCPWCCKNCNCNVCLSSRGMIETSKRNVTDGEKVHHLQYMLKLLLPFVQQICEEQNQEQEIEAQIQGKSCFEIEIPQTQCDVGERVYCDHCATSIVDLHRSCAKCSFELCLSCCKEIRNGSVKPRSEMKAQYIDRGYSYMHGGDPDLLQMFSNASNIVERHVQMFTRWNANDDGNIKCAPKQLGGCGGCVLELKRMLPSERVPDLINKAHHLLKRFCNIEDEVNVDEDLFEFQKHWRNGEPAIVEGVLRQGTGLSWDPMVAFKALSGNLPSGDNSNDTVTVVDCLSGCEEEMNTHQFLEGYKDGQKYINLWPTLLKIKDWPPSDNFENVLPRHFDEFIRCLPFQEYCDPRAGILNLASKLPPHVIKPDLGPKTYIAYGIKEELGRGDSVTKLHCDMADAVNILTHTTEVKLTDDQYSAIRKIKRAHQAQDKKEGLAKKNRGPSKSDEKSITEETTEIGGALWDIFRREDTKYLEAYLRKHSNEFRHLYCSQVKEVIHPIHDQCFYLTSEHKKKLKEEFGVEPWTFEQKLGEAVFIPAGCPHQVRNLKSCTKVAVDFVSPENVHMCMHLTEEFRGLPKNHKAREDKLEIKKMILYSVDQVVKELEAFI* 734
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g2222 733 MobiDBLite consensus disorder prediction 14 36 - -
Tpr2g2222 733 Gene3D Cupin 337 708 - -
Tpr2g2222 733 ProSiteProfiles JmjC domain profile. 475 699 IPR003347 -
Tpr2g2222 733 PANTHER TRANSCRIPTION FACTOR JUMONJI (JMJC) DOMAIN PROTEIN 21 733 - -
Tpr2g2222 733 MobiDBLite consensus disorder prediction 1 46 - -
Tpr2g2222 733 CDD cupin_RmlC-like 623 683 - -
Tpr2g2222 733 MobiDBLite consensus disorder prediction 551 578 - -
Tpr2g2222 733 SMART cupin_9 456 699 IPR003347 -
Tpr2g2222 733 Pfam JmjC domain, hydroxylase 577 682 IPR003347 -
Tpr2g2222 733 ProSiteProfiles Zinc finger RING-type profile. 86 131 IPR001841 -
Tpr2g2222 733 SUPERFAMILY Clavaminate synthase-like 340 725 - -
Tpr2g2222 733 PANTHER JMJC DOMAIN-CONTAINING HISTONE DEMETHYLATION PROTEIN 21 733 IPR045109 GO:0032454|GO:0033169
Tpr2g2222 733 Pfam Zinc-finger domain of monoamine-oxidase A repressor R1 80 151 IPR018866 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g2222 Tpr-Chr2 26573539 26577436 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Tpr2g2222 JmjC 5.1e-15 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g2222 K15601 K21989 gmx:100801772 927.932