Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g2200 ATGGAAAGGAAAGGAGATATAGCTTTGTTTTGTTTGGCTTTGTTCTTCATGTGGACTTCAGTAACTGCTTTGCTTTCTCCTAAAGGTGTCAACTATGAAGTTCAAGCTTTAATTAGAATTAAGAATTCTTTGGTGGATCCTCATTCTGCTTTGAATAATTGGGATGCTGAGTCTGTTGATCCTTGTAACTGGGCTATGGTCACTTGTTCTCCTTCTCCTGATCATTCTGTTGTTGCCCTTGGAATTCCAAGCCAAAATATATCTGGTACTCTCTCATCAAGCATAGGTTCCTTACCAAACCTTCAAACTGTGCTGCTGCAGGATAATAATATCACAGGACCAATTCCTTCTGAGATTGGAAAGCTTCAAAAGCTTCAAACTCTTGATCTTTCCGACAATTTCTTCACCGGTCAACTTCCAGATTCTCTTTCTCATATGAAGGGTCTTCATTATTTGCGGCTAAACAATAACAGTCTTTCTGGACCAATTCCTTCATCAGTAGCTAACATGTCACAGCTTGTCTTTCTGGATCTTTCTTTTAATAACTTAAGTGGACCTGTACCTAGATTAAATGCTAAAACATTCAATATTGTAGGCAATCCCCAGATATGTGCAACTGAAGTTGAACAAAACTGTTTTAGAACAACATTAATTTCTTCTGTTATGAATAATAACTCTCAAGATTTACAATCCTCTAATAGACCAAAAAGTCACAAAGCTGCCTTAGCTTTTGCTTCAAGCCTAAGCTGCATCTGCTTACTAATTCTGGGATTTGGCTTCCTTCTGTGGTGGAGACGAAGATATAACAAGCAAATATTCTTCGACACGAATGAACAATACCGCGAAGAGATTTGCCTTGGAAACCTGAAGAAGTTCCATTTCAGAGAACTTCAAGTTGCTACGAATAACTTTAGCGGCAAAAACTTAGTTGGAAAAGGTGGTTTTGGGAATGTTTACAAAGGTAGTCTCCGAGATGGTACAGTTATAGCAGTAAAAAGGCTCAAAGATGGTAATGCAGTTGGTGGTGAAATCCAATTCCAAACTGAACTAGAGATGATAAGCTTAGCTGTTCATAGGAATCTTCTTCGCCTGTATGGATTTTGCACGACAGCTACAGAGAGGCTCTTGGTTTATCCTTATATGTCTAATGGTAGTGTTGCTTCTCGTCTAAAAGGCAAGCCATCTCTAGACTGGGCTACAAGGAAGAGAATAGCATTAGGAGCAGGAAGAGGCTTACTATATTTACATGAACAATGTGATCCAAAGATTATTCATAGAGATGTAAAAGCAGCAAATATCTTGCTTGATGATTATTGTGAAGCTGTAGTAGGAGACTTTGGTTTAGCAAAACTATTGGACCACAGAGATTCACATGTGACAACAGCTGTGAGAGGAACTGTAGGACACATAGCTCCTGAATACCTATCAACAGGACAATCTTCAGAGAAAACAGATGTATTTGGATTTGGAATTCTTCTACTTGAATTGATTTCTGGACAAAGAGCTCTTGAATTTGGGAAAGCTGTTAACCAGAAAGGAGCTATGCTTGATTGGGTAAAGAAAATACATCAGGAGAAGAAAATCGACGTGTTAGTCGACAAGGATCTGAAAAACAACTATGACAGGATAGAATTAGATGAAATAGTTCAAGTGGCTCTTTTATGTACTCAATACTTACCAAGTCACAGACCAAAAATGTCAGAAGTTGTTAGAATGCTTGAAGGAGATGGACTTGCAGAGAAATGGGAAGCTTCACAGAGAGCTGAATCAACAAGAAGTAGAGGAAATGAACTCTCGTCTTCAGAACGTTATTCTGATCTTACCGATGACTCTTCATTGCTTGCACAAGCGATGGAACTTTCTGGACCAAGATAA 1875 0.3861 MERKGDIALFCLALFFMWTSVTALLSPKGVNYEVQALIRIKNSLVDPHSALNNWDAESVDPCNWAMVTCSPSPDHSVVALGIPSQNISGTLSSSIGSLPNLQTVLLQDNNITGPIPSEIGKLQKLQTLDLSDNFFTGQLPDSLSHMKGLHYLRLNNNSLSGPIPSSVANMSQLVFLDLSFNNLSGPVPRLNAKTFNIVGNPQICATEVEQNCFRTTLISSVMNNNSQDLQSSNRPKSHKAALAFASSLSCICLLILGFGFLLWWRRRYNKQIFFDTNEQYREEICLGNLKKFHFRELQVATNNFSGKNLVGKGGFGNVYKGSLRDGTVIAVKRLKDGNAVGGEIQFQTELEMISLAVHRNLLRLYGFCTTATERLLVYPYMSNGSVASRLKGKPSLDWATRKRIALGAGRGLLYLHEQCDPKIIHRDVKAANILLDDYCEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGQRALEFGKAVNQKGAMLDWVKKIHQEKKIDVLVDKDLKNNYDRIELDEIVQVALLCTQYLPSHRPKMSEVVRMLEGDGLAEKWEASQRAESTRSRGNELSSSERYSDLTDDSSLLAQAMELSGPR* 625
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g2200 624 Gene3D Ribonuclease Inhibitor 30 214 IPR032675 -
Tpr2g2200 624 ProSitePatterns Protein kinases ATP-binding region signature. 310 332 IPR017441 GO:0005524
Tpr2g2200 624 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 7 624 - -
Tpr2g2200 624 MobiDBLite consensus disorder prediction 581 624 - -
Tpr2g2200 624 ProSitePatterns Serine/Threonine protein kinases active-site signature. 423 435 IPR008271 GO:0004672|GO:0006468
Tpr2g2200 624 Pfam Leucine rich repeat 124 183 IPR001611 GO:0005515
Tpr2g2200 624 SMART serkin_6 304 559 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr2g2200 624 PANTHER PROTEIN NSP-INTERACTING KINASE 2-LIKE 7 624 - -
Tpr2g2200 624 SUPERFAMILY Protein kinase-like (PK-like) 283 574 IPR011009 -
Tpr2g2200 624 Gene3D Transferase(Phosphotransferase) domain 1 381 593 - -
Tpr2g2200 624 Pfam Protein kinase domain 307 571 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr2g2200 624 Pfam Leucine rich repeat N-terminal domain 31 70 IPR013210 -
Tpr2g2200 624 Gene3D Phosphorylase Kinase; domain 1 273 380 - -
Tpr2g2200 624 SUPERFAMILY L domain-like 32 197 - -
Tpr2g2200 624 ProSiteProfiles Protein kinase domain profile. 304 559 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr2g2200 624 MobiDBLite consensus disorder prediction 591 615 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g2200 Tpr-Chr2 26354722 26360345 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g2200 8 624 Receptor kinase-like Gene Family AT5G16000 70.973 0.0 907
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Tpr2g2200 Pkinase 6.1e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g2200 - - gmx:100790194 1096.65