Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g2193 ATGAAGATCATCGCAGCTTATTTGCTTGCTGTTTTGGGCGGTAACGCATCCCCTTCTGCTGCCGATATCAAAAACATCCTTGGTTCAGTTGGAGTTGAGGGTGAGGACTCGAATATTGAGTTGCTCTTGAGCGAAGTCAAGGGAAAAGATTTTGCTGAGCTTATTGCAAGTGGAAGAGAAAAGTTGGCTTCCGTTCCATCTGGTGGTGGCGCAGTTGCTGTTTCCGCTGCACCCGGTGGAGGTGCTGGAGCTGCTGCCGCACCTGCTGCTGAAGCAAAGGAGGAAAAGAAGGTTGAAGAAAAGGAAGAGTCCGATGATGACATGGGCTTCAGCTTGTTTGACTAA 345 0.4928 MKIIAAYLLAVLGGNASPSAADIKNILGSVGVEGEDSNIELLLSEVKGKDFAELIASGREKLASVPSGGGAVAVSAAPGGGAGAAAAPAAEAKEEKKVEEKEESDDDMGFSLFD* 115
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g2193 114 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN FAMILY MEMBER 1 114 IPR044076 GO:0002182|GO:0003735|GO:0022625
Tpr2g2193 114 Hamap 50S ribosomal protein L12 [rpl12]. 2 114 IPR027534 GO:0003735|GO:0005840|GO:0006414
Tpr2g2193 114 Gene3D - 1 59 IPR038716 -
Tpr2g2193 114 Pfam 60s Acidic ribosomal protein 17 113 - -
Tpr2g2193 114 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN P2-1 1 114 - -
Tpr2g2193 114 MobiDBLite consensus disorder prediction 90 104 - -
Tpr2g2193 114 CDD Ribosomal_P2 1 114 IPR044076 GO:0002182|GO:0003735|GO:0022625
Tpr2g2193 114 MobiDBLite consensus disorder prediction 78 114 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g2193 Tpr-Chr2 26304895 26306596 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g2193 1 70 Cytoplasmic Ribosomal Protein Gene Family AT2G27710 81.429 2.48e-34 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g2193 K02943 - nnu:104586918 124.02