Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g2191 ATGAGAGGGGTATTTAGGGCTTTTCGCACTCGAACCCTAGTCTTATTCTCTTCTCCACGTTCGATGATAACATTTCTCTCCCTTCTCTCCCCTCTTCTACGAGCTTCCTTCTCTGCGTCCACAAGCTATCATCTTTCCTTCTGTGCTGAAGCGAAGAGTTGTTCGATGGCAAACGATACTTCTAGTTCGGATTCCCATCATAAACGTCTTGGTCTTTTAAAAGATCAAGTTCATTTGGTTAAAAGGAAAGACTGTAATCGCTATGAGATTGCTTCAATACAAGATCATCTATCATTTGAGAAGGGGTTTTTTATAGTAATTCGCGCATGCCAATTGTTAGCCCAAAAGAATGATGGAATAATATTGGTTGGGGTGGCAGGACCTTCAGGAGCAGGAAAGACTATATTTACTGAAAAGATACTCAACTTCATGCCCAGCATTGCTGTCATTTCAATGGATAATTACAATGATGCTAGTCGAATTGTTGATGGAAACTTTGATGATCCACGCTTGACTGACTATGACACATTGCTCCAGAATTTACATGATTTAAAGGAAGGAAAGACAGTCCAGGTTCCGATATATGATTTCAAGTCCAGCTCACGTATAGGATACAGGACTGTAGAATCCCCGAGCTCCCGTATTGTGATTATAGAGGGTATCTATGCCTTGAGTGAGAAGTTGCGGACTTTGCTGGACCTTCGAGTTTCTGTAACAGGTGGAGTTCACCTTGACCTTGTAAAGCGAGTGATACGTGACATACAACGTGCAGGCCAAGAACCTGAAGAAATTATTCATCAAATATCTGAGACGGTATATCCAATGTACAAGGCTTTTATTGAGCCTGATCTTAAGACGGCACATATAAAAATCAGTAACAAATTTAATCCATTTACTGGATTCCAGAGCCCTACTTACATATTAAAGTCAGCAAGAAATGTAGCAGTTGATAAAATTAAAGCTCTTCTCTCTGATGATTTTAAGGAAACAACCGAGCAAACTTATGATATATATCTTCTACCTCCCGGTGAAGATCCAGAAACTTGCCAATCATATTTAAGGATGCGAAACAAGGATGGGAAATACAGTCTCATGTTTGAGGAATGGGTGACAGACAGTCCCTTTGTCATATCACCAAGAATTACTTTTGAGGTCAGTGTACGCCTCCTTGGTGGACTAATGGCCTTGGGATATACGATAGCTACTATCCTCAAGAGAAACAGCCATGTCTTATCTGATGATAGGGTTTGTGTGAAACTAGATTGGCTTGAGCAACTTAATCGACATTATGTTCAGGTACAAGGGAGAGATCGCTCAATTTTGAAAGACATTGGAGATCAGTTGGGTCTCGAAGGTTCCTACATTCCTCGTACATACATTGAGCAAATTCAACTTGAAAGGCTTGTGAATGAGGTTATGGCCCTACCAGAAGATTTGAAGACAAAACTCAGCCTGGATGAGGATTTGGTTTCAAGCCCCAAAGAAGCACTTTCTAGAGCCTCTGCTGACAGGATTGCCATGAGAAATAAGAATATGACGAGAGGATTGTCACAGTCATATACAAACCAAAGGGACAAAAATGCAGCCAAAGTTAATGGATATTTTACCAACAATCGAAGGTTTGGTGAAAGAAGTTCAGATTCTTCGACAACAGAAGTAAATCAGGGAGCCATTAGTCAGCTTTCAGAACAGATTTCTGCCCTCAATGATAGAATGGATGAATTTACAATTCGTATTGAAGAGCTTAATTGCAAGCTAACCATTAAAAATAATTCTCCAAGCCAACAAAATCTGTCAGCTCAAGCTGAAGCTTGCAATGGTTCTGCTCCTACGTCTTACTTCATCAACAGTTTGGGCAATGGTAGCATAACTGGTTCCAAGATGCAACATTCCTCGTCTTCATCGCAATTAAATAAGGATTCTCCCTTAACGGATGAGATATCAGGCATTGCACGTGGCCAGCGTCAGATTATGCATCAAATGGACAATCTTAATAATCTTCTCCGGGGTAGCTTAGTGGAGAAGTCTCAGCAAACAAGAACCAACCAGAAAAGCATAAATACAGATTCAAATTCCAATACAGCTAGTGTTATAGTGGTAGTAGCAGTTGGTTGTTTGGGGATCTTCTTGATGAAAGGTTTTTGGACCAGAAAGTGA 2157 0.4047 MRGVFRAFRTRTLVLFSSPRSMITFLSLLSPLLRASFSASTSYHLSFCAEAKSCSMANDTSSSDSHHKRLGLLKDQVHLVKRKDCNRYEIASIQDHLSFEKGFFIVIRACQLLAQKNDGIILVGVAGPSGAGKTIFTEKILNFMPSIAVISMDNYNDASRIVDGNFDDPRLTDYDTLLQNLHDLKEGKTVQVPIYDFKSSSRIGYRTVESPSSRIVIIEGIYALSEKLRTLLDLRVSVTGGVHLDLVKRVIRDIQRAGQEPEEIIHQISETVYPMYKAFIEPDLKTAHIKISNKFNPFTGFQSPTYILKSARNVAVDKIKALLSDDFKETTEQTYDIYLLPPGEDPETCQSYLRMRNKDGKYSLMFEEWVTDSPFVISPRITFEVSVRLLGGLMALGYTIATILKRNSHVLSDDRVCVKLDWLEQLNRHYVQVQGRDRSILKDIGDQLGLEGSYIPRTYIEQIQLERLVNEVMALPEDLKTKLSLDEDLVSSPKEALSRASADRIAMRNKNMTRGLSQSYTNQRDKNAAKVNGYFTNNRRFGERSSDSSTTEVNQGAISQLSEQISALNDRMDEFTIRIEELNCKLTIKNNSPSQQNLSAQAEACNGSAPTSYFINSLGNGSITGSKMQHSSSSSQLNKDSPLTDEISGIARGQRQIMHQMDNLNNLLRGSLVEKSQQTRTNQKSINTDSNSNTASVIVVVAVGCLGIFLMKGFWTRK* 719
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g2191 718 ProSiteProfiles CYTH domain profile. 303 465 IPR023577 -
Tpr2g2191 718 CDD UMPK_like 122 294 - -
Tpr2g2191 718 PRINTS Uridine kinase signature 120 137 - -
Tpr2g2191 718 PRINTS Uridine kinase signature 187 202 - -
Tpr2g2191 718 PRINTS Uridine kinase signature 243 253 - -
Tpr2g2191 718 PRINTS Uridine kinase signature 279 292 - -
Tpr2g2191 718 Gene3D - 121 304 IPR027417 -
Tpr2g2191 718 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 72 293 IPR027417 -
Tpr2g2191 718 PANTHER PHOSPHORIBULOKINASE/URIDINE KINASE-LIKE PROTEIN 53 709 - -
Tpr2g2191 718 Pfam CYTH domain 321 459 IPR023577 -
Tpr2g2191 718 Pfam Phosphoribulokinase / Uridine kinase family 123 291 IPR006083 GO:0005524|GO:0016301
Tpr2g2191 718 SUPERFAMILY CYTH-like phosphatases 324 462 IPR033469 -
Tpr2g2191 718 Coils Coil 558 585 - -
Tpr2g2191 718 PANTHER URIDINE KINASE 53 709 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g2191 Tpr-Chr2 26252887 26265903 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g2191 121 291 PRT Gene Family AT5G40870 27.222 9.87e-17 81.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g2191 K00876 - gmx:100797542 1124.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g2191 2 26252887 26265903 Tpr2g2191 2 26252887 26265903 ECH