Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g2180 ATGGAATTCTCTAACCAGTTCAAAGAATCATTTAGGTATGGTGTTATTGCTGGGTATTGTTTCGCTGCAACTTTTGTCATTGTTTTTTATTTGTCCTATTTTCTACCCATACAACTTATCAAGATTTGGAAAATTAAGATCATTGGACATAAGAAAACAGTTGAGATGAGCAAATTGCTTATTCAGGACTTCAGACTGGAAAAGATAAAAGAGAAACTAAAGAAAAATAGACAAAAAGCCAAAATCTTGCCTATGGAGGAGTTGCTAGAGAAAAGAATACAGATCAATAAAGTTGGAAGATTGACTTATAGAATGCACTTCACAAAACTCTGTCATGCAACAGAAAACTTTAGCATGAACAATGTCATTGGGTTGGGAGTAACTGGTATAATGTACAAGGCAACTCTTCCAAATGGTTGTTTCTTGGCAGTTAAGAAACTACATGATTCTCAATTGTCTATCAAAACGTTTGAGTTAGAAATAATGATTTTGGGACAATACAATCATAGAAACATAGTTCCTTTGATTGGTTTTTGTATAGAAGAAGGAAAAACAGAAATTTTTTTGGTGTATAAATACATGTCAAATGGAAAGCTTTCTGATAAGTTGAATGAAACTACAAAATTAGGATGGCAAATAGTTATCAAAATTGCACTTGGAGTTGCAAGAGGTTTATGTTGCCTCCATCATAGCCTGCATATGGTTCATCTCAATATAAATTCTGATTGTATCTTGCTAGGGAAAAATTTTGAGCCAAAAATATCCAATTTTGGAGGAGCCATGTTTATGAATAATGATTTGAACAAAAACATAGGACTTGACAAGAAGGATGTTTTTGACTTTGGTTGTCTGCTTTTTGAGCTGATTAATGGGAAGAAATTTGGCCAAATATGTGAATATAATCAAGTAAAAATGTTGGAGGATGACCCTTCTAGATTCTGTGATGCAGTGGATGAATATATAAACAAGATAGAATTTGAAGATGAGGTATATACTCTTCTTAGAGTAGCACGTGAATGTGTTCATCCTTTATTTGAACAAAGGCCTACTATGTTTAAGGTGTACAACAAGATATGCAACATATGGGAGAAAGATAAAATTTGTGAAAATTCTGACTTCTCATTTATAGATTCTGTTACTCCTACTGTTAGCCTAATATCTAGCCAGCCAGATATCTTGCAATCAAGGATTAAAGGTGTAAAGTTAGACAATCAAGGATTGTTATTTTAA 1230 0.3285 MEFSNQFKESFRYGVIAGYCFAATFVIVFYLSYFLPIQLIKIWKIKIIGHKKTVEMSKLLIQDFRLEKIKEKLKKNRQKAKILPMEELLEKRIQINKVGRLTYRMHFTKLCHATENFSMNNVIGLGVTGIMYKATLPNGCFLAVKKLHDSQLSIKTFELEIMILGQYNHRNIVPLIGFCIEEGKTEIFLVYKYMSNGKLSDKLNETTKLGWQIVIKIALGVARGLCCLHHSLHMVHLNINSDCILLGKNFEPKISNFGGAMFMNNDLNKNIGLDKKDVFDFGCLLFELINGKKFGQICEYNQVKMLEDDPSRFCDAVDEYINKIEFEDEVYTLLRVARECVHPLFEQRPTMFKVYNKICNIWEKDKICENSDFSFIDSVTPTVSLISSQPDILQSRIKGVKLDNQGLLF* 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g2180 409 Gene3D Transferase(Phosphotransferase) domain 1 270 374 - -
Tpr2g2180 409 Pfam Protein tyrosine and serine/threonine kinase 119 290 IPR001245 GO:0004672|GO:0006468
Tpr2g2180 409 PANTHER PROTEIN KINASE, PLANT-TYPE, PUTATIVE-RELATED 4 366 - -
Tpr2g2180 409 Gene3D Transferase(Phosphotransferase) domain 1 194 269 - -
Tpr2g2180 409 ProSiteProfiles Protein kinase domain profile. 117 363 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr2g2180 409 PANTHER RECEPTOR-LIKE PROTEIN 55 4 366 - -
Tpr2g2180 409 Gene3D Phosphorylase Kinase; domain 1 66 193 - -
Tpr2g2180 409 SUPERFAMILY Protein kinase-like (PK-like) 101 356 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g2180 Tpr-Chr2 26133787 26141145 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g2180 91 364 Receptor kinase-like Gene Family AT1G69990 30.719 3.32e-38 143
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xa Tpr2g2180 PK_Tyr_Ser-Thr 1e-19 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g2180 - - mtr:MTR_5g057660 464.151