Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g2179 ATGGTTCCAAGTGAGATCAGAGGAATCAATTATCTACCAGCTCCTCCTGAAAATTCATTCCAAATTCCACAAAACTTTGTCTTACCACAAAATGAAATTCCAAACTTCCATCTAAATAATCTCTTAAACAGCTTACCAACAAATTATCATTATCCATCAGCAGGCCATGAATTTGCACCTCCTTCATGTCTTAGTAGCAACTCAACTACTTCTGATGAAGCAGATGAACTTCAATTCAATATCATCGACGAAAGGAAGCACCGACGAATGATATCAAACCGAGAATCTGCTAGGAGATCAAGGATGAGGAAACAAAAACACTTAGATGAACTTTGGTCACAAGTTGTAAGACTTAGAACTGAAAATAACAACCTTGTTGATAAACTTAACCATGTTTCTGAGTCACATGACAAAGTTGTTCAAGAAAATGCACGTCTCAAGGAAGAAACTTTCGATCTTCGTCAAATGGTAGCCGATATGCAAATCGGTAACTCTTTTCCTTGTAACATGGAAGATTTTGGTGAAATTCCATGCAGCAGTTCACCACACAAAGATGATTAA 561 0.3708 MVPSEIRGINYLPAPPENSFQIPQNFVLPQNEIPNFHLNNLLNSLPTNYHYPSAGHEFAPPSCLSSNSTTSDEADELQFNIIDERKHRRMISNRESARRSRMRKQKHLDELWSQVVRLRTENNNLVDKLNHVSESHDKVVQENARLKEETFDLRQMVADMQIGNSFPCNMEDFGEIPCSSSPHKDD* 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g2179 186 Pfam bZIP transcription factor 85 143 IPR004827 GO:0003700|GO:0006355
Tpr2g2179 186 Gene3D - 83 139 - -
Tpr2g2179 186 PANTHER BZIP PROTEIN (ATBZIP48) 1 183 - -
Tpr2g2179 186 PANTHER BASIC LEUCINE ZIPPER 43-RELATED 1 183 IPR044521 -
Tpr2g2179 186 SUPERFAMILY Leucine zipper domain 85 135 IPR046347 GO:0003700|GO:0006355
Tpr2g2179 186 SMART brlzneu 81 145 IPR004827 GO:0003700|GO:0006355
Tpr2g2179 186 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 88 103 IPR004827 GO:0003700|GO:0006355
Tpr2g2179 186 CDD bZIP_plant_GBF1 86 137 IPR045314 GO:0003700|GO:0006355
Tpr2g2179 186 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 83 146 IPR004827 GO:0003700|GO:0006355
Tpr2g2179 186 Coils Coil 129 149 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g2179 Tpr-Chr2 26128535 26129390 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g2179 29 176 bZIP Transcription Factor Family AT3G30530 54.651 7.29e-52 162
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Tpr2g2179 bZIP_1 8.8e-12 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g2179 - - gmx:100778078 273.478