Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g2174 ATGATTATTAATTTCTCAAAGTTGAGGAAGAAGTGCTTAAAGGGCAGGTCTTTAGCTTATTTAAACAATTTCACAATTGCAGTGGCGGTGGTTAATCATCAAAAGCTCTCTTTTTTATGTAAGCGTGAGTTTGATATGAGTGACAAAGAAAAGTTTGAGGTTGATGGAAATGGGGAGCCTATGAGTTATTCTGATGGTATGCCTCCTGATTGGAGATTTGGTGGCGGTGGCAATCTTGTAAATTCATCTCTTGGGTTGGTTTCTATTGGGAATTCTATGAATATCGATAGAGAGGATTTAATTGGTTCTTCTTCATGTTCTTCTGCTTCAATGGTGGACTCATTTAGTCCTAACTTTTGGGACCATTCAGCAAATTCTCAAAATTTGGGGTTTTGTGATATTAATGGGAGTTCTTCAAACACAATTGGAATTAGAAAAGACGGGTTTGGTTTCGGAAGAGGTGGACATGAACATGGAACACTTGAAGTTGGATGGAACCAAGCTAATTCTATGATGATGAAAGGGGATGGTTTTTTACAGAATGTACAGGGGGTTTTTCCTCAGAGTTTATCTCAGTTTCCAACTGATTCTGGATTTATTGAAAGGGCTGCGAGGTTCTCGTGTTTTGGTGGAGGGAATTTCGGTGATGTTGTGAACTCCTATGGGATTCCTCAATCTATGACTATGTATGCCGGCACAATTCATGGAGCTAGAGATGGTCATGCAGGCATTGGATTGAAAGTTGGAATTGGAGGACAGTCTCAAGAAAGAGATGATCCTAAGGTAGTTGAAGGTACGAAAGGCGTGTCTCTGTCTGTTGAGCAATTGGCTGCTAGAGGAAGCCCTTTAAAGAATGATAAAAGTGAGAGTCGTGCCGTGTCTCAAGATGACGGGAAGAAAGCTCTTGTTAGGAATGTTAATGATTCTGACAGAGGTGAATCGGGTGATGATGATGTTCGTGGTGATGGACAGGAAGGTTCGCCTATGTTGGAGGGTACTACAAGTGGAGAACCTTCTATTAAAGGACTAAACTCGAAGAAAAGGAAAAGAAGTGGACAAGATCCTGATAATGATAAAGCCGATGGAGCTCGAGAATTACAAAGTGAAGGTGCAAAGGACAATGCGGAGAATCAACAGAAAGGAGACCAAACCAAGGATTCTGGTAAGAATGCCAAACAGGGCTCTCAAACTTCTGATCCACCGAAGGAAGAATACATACATGTTAGGGCTCGACGGGGCCAAGCAACAAACAGTCATAGCCTTGCAGAGAGGGTGAGGAGAGAAAAGATAAGTGAAAGAATGAAGTTTCTTCAAGAACTTGTGCCTGGATGCAGCAAGGTCACCGGCAAGGCAGTGATGCTGGATGAAATCATCAATTATGTACAGTCACTTCAACGGCAGGTTGAGTTTTTGTCTATGAAACTTGCAACAGTAAATCCACGGCTGGATTTTAATATTGAAGGCCTTCTTGCTAAAGATATTCTTCACCAACGGCCTGGTCCTTCATCCGCACTAGGGTTTCCTCTGGAGATGTCTATGAATTTTCCACCTTTACATCCATCTCAACCAGGGATGATTCAGTCAGTTATGGCAAACATGACAAACCCGTCCGATATCCTTCGAAGAACTATTCATCCACAGTTAACACCCTTGACTGGAGGATTCAAGGAGCCAAGTCAGATGCCTGATGTGTGGGAGGACGAGCTTCATAATGTTGTACATATGAGCTTTGCAACAACTGCTCCCTCGACTAGCCAAGATGTAGATGGTACTGCGGCAGCAAATCAGATGAAAGTTGAACTTTGA 1806 0.4241 MIINFSKLRKKCLKGRSLAYLNNFTIAVAVVNHQKLSFLCKREFDMSDKEKFEVDGNGEPMSYSDGMPPDWRFGGGGNLVNSSLGLVSIGNSMNIDREDLIGSSSCSSASMVDSFSPNFWDHSANSQNLGFCDINGSSSNTIGIRKDGFGFGRGGHEHGTLEVGWNQANSMMMKGDGFLQNVQGVFPQSLSQFPTDSGFIERAARFSCFGGGNFGDVVNSYGIPQSMTMYAGTIHGARDGHAGIGLKVGIGGQSQERDDPKVVEGTKGVSLSVEQLAARGSPLKNDKSESRAVSQDDGKKALVRNVNDSDRGESGDDDVRGDGQEGSPMLEGTTSGEPSIKGLNSKKRKRSGQDPDNDKADGARELQSEGAKDNAENQQKGDQTKDSGKNAKQGSQTSDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQELVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDFNIEGLLAKDILHQRPGPSSALGFPLEMSMNFPPLHPSQPGMIQSVMANMTNPSDILRRTIHPQLTPLTGGFKEPSQMPDVWEDELHNVVHMSFATTAPSTSQDVDGTAAANQMKVEL* 602
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g2174 601 CDD bHLH_AtBPE_like 404 489 - -
Tpr2g2174 601 Gene3D - 411 484 IPR036638 GO:0046983
Tpr2g2174 601 MobiDBLite consensus disorder prediction 277 404 - -
Tpr2g2174 601 MobiDBLite consensus disorder prediction 342 387 - -
Tpr2g2174 601 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 414 464 IPR011598 GO:0046983
Tpr2g2174 601 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 56 600 IPR024097 GO:0006355
Tpr2g2174 601 MobiDBLite consensus disorder prediction 284 324 - -
Tpr2g2174 601 PANTHER BHLH TRANSCRIPTION FACTOR 56 600 - -
Tpr2g2174 601 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 412 483 IPR036638 GO:0046983
Tpr2g2174 601 Pfam Helix-loop-helix DNA-binding domain 417 465 IPR011598 GO:0046983
Tpr2g2174 601 SMART finulus 420 470 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g2174 Tpr-Chr2 26038076 26042141 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g2174 98 600 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G68920 43.822 1.40e-111 341
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Tpr2g2174 HLH 6.9e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g2174 - - gmx:100797720 760.37
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g2174 2 26038076 26042141 Tpr2g2174 2 26038076 26042141 ECH