Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g2161 ATGGTTTCAAAAACAAGAATCACTATCATTAATGTTGCTATCATAGTAACATTATTCACAGCCAATGTTGTATTATCAGATGAAACAATCCCAGCAGATAGAGGCCAATTAGAAACATGGTTCAGTAGCATTATTACTCCATTAGAACAAAGAAAAGATACCCTTGACCCTGCATTGGTTACTGCAGAAGCTACTCCTAAAATTATTAAAGTAAATCAAGATGGTAGCGGCGAATTCAAAACCATCACCGATGCTCTTAATAGCATACCTACTAGTAACACTCAACGTGTGATTCTTAACATCGGTGCTGGAAATTACAACGAAAAAATCAAAGTTGAGAGGGCAAAGCCTTTTGTTACATTTTATGGTTCACCTGATAATATGCCAAATATAACCTATGGTGGTACTGCATCACAATATGGCACAGTTGATAGTGCTACGGTGATTGTCGAAGGAGATTATTTTGTAGCTGCTAACGTCATAATATCGAATTCTGCACCATTACCTGATGGAAAAAGGCCAGGTGCTCAAGCTGTTGCATTGAGAGCTTCTGGTGACAAAACAACATTTTATAATTGTCAATTCATTGGGTTCCAAGACACAATTTGTGATGATAGGCATAATCATTTTTTCAAAGATTGTTTAATTCAAGGCACAGTGGATTACATATTTGGAAGTGGAAGGTCACTATATTTGAAAAGTGAATTGAGATCCCTTGGTGACACTGGGCCAACAGTGATAGTGGCACAAGCAAGAAGTAGTCCAACAGAAGATGCTTTATACTCATTTGTGCATTGTGATATAACTGGAACTGGACATGATACTTTCTTAGCCAGAGCATGGATGTCGAGTCCCGAAGTTGTGTTTGCTTACAATAATATTACTGATGTTATTAATCCATTGGCTTGGAATAACAACTTGCACCCTGAATATGACAAAACTATTCACTTTGGAGAATACGAGAACACAGGACCTGGTGCAGATACTAAAGGGCGTGCGCCTATGATGAAGCAACTAACCGCAGATGAGGTTAAACCTTACATAACCCTTGAAATGATTCAAGCAACTAAATGGCTTCTTCCTCCTCCAAAAATCTAA 1098 0.3798 MVSKTRITIINVAIIVTLFTANVVLSDETIPADRGQLETWFSSIITPLEQRKDTLDPALVTAEATPKIIKVNQDGSGEFKTITDALNSIPTSNTQRVILNIGAGNYNEKIKVERAKPFVTFYGSPDNMPNITYGGTASQYGTVDSATVIVEGDYFVAANVIISNSAPLPDGKRPGAQAVALRASGDKTTFYNCQFIGFQDTICDDRHNHFFKDCLIQGTVDYIFGSGRSLYLKSELRSLGDTGPTVIVAQARSSPTEDALYSFVHCDITGTGHDTFLARAWMSSPEVVFAYNNITDVINPLAWNNNLHPEYDKTIHFGEYENTGPGADTKGRAPMMKQLTADEVKPYITLEMIQATKWLLPPPKI* 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g2161 365 ProSitePatterns Pectinesterase signature 2. 216 225 IPR033131 -
Tpr2g2161 365 Gene3D - 63 361 IPR012334 -
Tpr2g2161 365 SUPERFAMILY Pectin lyase-like 64 359 IPR011050 -
Tpr2g2161 365 PANTHER PECTINESTERASE 63-RELATED 34 360 - -
Tpr2g2161 365 Pfam Pectinesterase 70 353 IPR000070 GO:0030599|GO:0042545
Tpr2g2161 365 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 34 360 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g2161 Tpr-Chr2 25902160 25903738 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g2161 11 365 Carbohydrate Esterase AT1G69940 51.389 2.84e-137 393
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g2161 K01051 - gmx:100786427 535.028