Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g2140 ATGGCTTTGATGAAAGATGGTATAGAAATTGTTGAATGTGATGTTAAAGTTATTCCAGCTACAGTTACAGAGAAAAAGAAACGAGGAAGAAAGAGTAATGCGGAGAAGAAAGAAGCTTTAAGGAAAATGTTAGAGAAAGATGATGATGGTAATGGAGATGACGTGGCAGTGGCAATGGCACCTTCTTCTGGAAAGAAACGCGGTAGAAAGAAAAAAACAGACAAGAAAGCTGAAACAGGTGAATGTAGTTTTTCTTCTGTTGTTGTTGTTGTCGGAAAGGGAAAGAGTAATGTGGTAGAAAAGGAAGTGAAGAAGAAGAAGAAGAAGGATAATCATGGTAGAAAAAGAAAGATTATTTTGGATGAAAATGATGTAGGGAAAGAGAAGAAGAAAGATAATCGTGGTAGAAAAAGAAAAATTATTGTTGATGATGTTGTGAAAAAGAAGGATAATCGTGGTAGGAAAAGAAAGATTATTGTTGATGATGTTGTGAAAAAGAAGGAAAATCGTGGTAGGAAAAGAAAGATTATTATTTCTAGTTCTGAAGATGATGAACAAGAGGAGGAAGAAGATGGTGATTTTGTTAAGAAAGAAAAGAAGGAACTTTATGGAAGAAAGAGAAAAATGGGTAATAATAGTAAAGGAAGTTATGCTTTAAGGAGTACTGATGGAAAAATGAAACATGATTGTATTTCTCAGGAGGAAACAAAGGTTAATGATGCCGCTGCTGCTGATGATGTTGTGCTATCCAGGTATATGTTGGAATATCTTCTTCCATATTTAAGACAAATAGATCTACAACAGATGGCTGAGAAGGATATAGAAGCTAAGATATTAGGGCTCTCACTCTCCGAGATAAACATTAAAGCAGCGGATTGCTCTAAAGACGAGACCGCTTATTGTGATAACTGCCAAACTTCAATATTTGACTACCACCGAAGCTGTACAAAATGCTCGTTTGACCTTTGTCTCGACTGTTCTTGGGAGCTTCGTCGTGGGAAGCTTCTAGGTGGTGCAGATCCAATTGAGTTTGAGTTTATCAACCGAGGGCGAGATTATCTGCATGGTGGAAATGAAGAGAGAATAATCAGAGAAAATGAATCTCATCCTGCCGTCCCACCTCATGTATGGTCACAATCTGGGTGGCATGCAAACAGCGATGGCAGCATTGCCTGTCCGAAAGCCAATAATGAATGTGATCATGGTTTCCTTGAGTTGAAAAGCATGCTTCCGCCAAATTGCGTCTCTGAGTTAGTATGTAAAGCAAATCAACTTAAAGAAACAATTAAGCTTAAATATGCAGAGGAGACTCTTGACAATAGCTGCTCTTGTTTGAAGGTTGTTAGAAACAATGCAGATGATATACCCGATAACACAAGGAAGGCAGCTTTTCGTGAACATTCCGATGACAATTTTTTATACTGTCCTAGAGCTATAGATCTACATAGTCATGAGAAGGATTTAAGACATTTTCAATGCCACTGGAGAAAAAGGGAGCCTGTAATTGTCAGCAATGTTCTTGAATCATGTACATCCGGTTTAAGCTGGGATCCGCTTGTCATGTGGCGTGCATTTCACCAGATAAGTGATACCGATCACAAGTCATTTTCGGATGTGAAGGCTATTGATTGCTTAGATTGGTGTCAGAGAAATTTTAATGTGCACCATTTCTTTACTGGATACACAAATGGTCGTAAGGATCAGCTTGATTGGCCTCAGGTATTGAAATTGGATGATTGGCCTCCTAATTTATCTGAGGAACGATTGCCTCATCATTGTGCTGAGTTCATATCTTCCTTGCCGTATAAAGAATATACAGATCCTTTCAAAGGCACTCTTAACCTTGCTTTGAAGCTGCCTGATAATGTTCACATGAAACCAAAAACATATATTGCTTATGGATTTGCTCAAGAGCTTGGACGGGGTGATTCTGTGACTAAGCTCCATTGTGATATGTCTGATGTTGTAAATGTGTTGACTCATATTGCTAAAGTGGAACTGGAAACTGCGAGCATTACTGCAATAAAGAAATTGAAACAAAAGCACCTTGAGCAAGACAAGAGAGAGCTACACGGTGATAATCATGACGGAGATACCAATGTTGACATGCTTGATGACCCGTCTTCTTCCATAACTGATTCAGACGAGCTAAATAGTTTAGATGGTGCTCTCTGGGATATTTTTCGGAGAGAGGATGTACCTAAATTGAATGAATATCTGAACAAGCATTTCAGAGAGTTCAGGCATGTTCATTGCTCTCCTTTAAAGCAGGTAATCCACCCCATCCATGATCAGACCTTTTATCTCACTATCGAGCATAAGAAGAGGCTTAAGGAGGAGTATGGAATTGAGCCTTGGACTTTTGTTCAGAAGCTAGGAGATGCTGTATTCATTCCCGCTGGCTGCCCCCACCAAGTCAGGAATTTGAAGTCATGCACCAAGGTTGCACTTGATTTTGTCTCTCCTGAAAATGTTGGTGAGTGTGTCCGTTTGACAGAGGAAATCCGCAAACTTCCGATAAATCACAGTTTCGCAGAGGACACATTGGAGGTGAAGAAAATGATTATACATGCTATGCTTGATGTGGTCAAAAAGTTGGACAAAGAAAGGTTAGTTGTTTTTCAATACAAGTGGGAGTTTAAAGTGAGCAACGCTACTGCAGAGGGAAAAAGTGTGCTGCATTTTCCAAAATTTATCAGCACTGGATGTTCGCTTCGTCAGGGTCAACCAATTCATGTAGTTTGTGATAACACTAAAGAAACAACCTGCTGTGATGTTATGAAGAATGACAGAAAACCACCTCAATACCATATAGGTGGTGGATGGTATGAGTTTGTTAGAAAGCTGAAACTGAAAGATGGCGATAAGATTGTGTTTACTCTTGACAATCCTCCACGATTCTTGAATGTCAGGGCAGTGAGACATACCGGAAGTTGA 2937 0.3936 MALMKDGIEIVECDVKVIPATVTEKKKRGRKSNAEKKEALRKMLEKDDDGNGDDVAVAMAPSSGKKRGRKKKTDKKAETGECSFSSVVVVVGKGKSNVVEKEVKKKKKKDNHGRKRKIILDENDVGKEKKKDNRGRKRKIIVDDVVKKKDNRGRKRKIIVDDVVKKKENRGRKRKIIISSSEDDEQEEEEDGDFVKKEKKELYGRKRKMGNNSKGSYALRSTDGKMKHDCISQEETKVNDAAAADDVVLSRYMLEYLLPYLRQIDLQQMAEKDIEAKILGLSLSEINIKAADCSKDETAYCDNCQTSIFDYHRSCTKCSFDLCLDCSWELRRGKLLGGADPIEFEFINRGRDYLHGGNEERIIRENESHPAVPPHVWSQSGWHANSDGSIACPKANNECDHGFLELKSMLPPNCVSELVCKANQLKETIKLKYAEETLDNSCSCLKVVRNNADDIPDNTRKAAFREHSDDNFLYCPRAIDLHSHEKDLRHFQCHWRKREPVIVSNVLESCTSGLSWDPLVMWRAFHQISDTDHKSFSDVKAIDCLDWCQRNFNVHHFFTGYTNGRKDQLDWPQVLKLDDWPPNLSEERLPHHCAEFISSLPYKEYTDPFKGTLNLALKLPDNVHMKPKTYIAYGFAQELGRGDSVTKLHCDMSDVVNVLTHIAKVELETASITAIKKLKQKHLEQDKRELHGDNHDGDTNVDMLDDPSSSITDSDELNSLDGALWDIFRREDVPKLNEYLNKHFREFRHVHCSPLKQVIHPIHDQTFYLTIEHKKRLKEEYGIEPWTFVQKLGDAVFIPAGCPHQVRNLKSCTKVALDFVSPENVGECVRLTEEIRKLPINHSFAEDTLEVKKMIIHAMLDVVKKLDKERLVVFQYKWEFKVSNATAEGKSVLHFPKFISTGCSLRQGQPIHVVCDNTKETTCCDVMKNDRKPPQYHIGGGWYEFVRKLKLKDGDKIVFTLDNPPRFLNVRAVRHTGS* 979
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g2140 978 Pfam JmjC domain, hydroxylase 720 819 IPR003347 -
Tpr2g2140 978 Gene3D - 879 977 IPR015300 -
Tpr2g2140 978 PANTHER JMJC DOMAIN-CONTAINING HISTONE DEMETHYLATION PROTEIN 30 868 IPR045109 GO:0032454|GO:0033169
Tpr2g2140 978 MobiDBLite consensus disorder prediction 23 53 - -
Tpr2g2140 978 Gene3D Cupin 474 845 - -
Tpr2g2140 978 MobiDBLite consensus disorder prediction 115 139 - -
Tpr2g2140 978 SMART cupin_9 589 836 IPR003347 -
Tpr2g2140 978 MobiDBLite consensus disorder prediction 23 80 - -
Tpr2g2140 978 MobiDBLite consensus disorder prediction 99 139 - -
Tpr2g2140 978 SUPERFAMILY Clavaminate synthase-like 479 859 - -
Tpr2g2140 978 ProSiteProfiles JmjC domain profile. 578 836 IPR003347 -
Tpr2g2140 978 SUPERFAMILY DNA-binding pseudobarrel domain 889 967 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g2140 Tpr-Chr2 25643662 25650158 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Tpr2g2140 JmjC 3.7e-15 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g2140 K15601 - vvi:100261347 687.952