Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g2114 ATGTTTTCATTGTTTTCAATGCTTAACTCATCTTCTTCTTCTTCTTCTTCTCCTTCTTCATTCTTTAGTATCATTATTCTCATCCAAACAACACTTCTTTTTAGTTTCTCTTTCTCTTCTTCTAACAATGAAGCCACAATTCTCTTCACATGGCTTCATAGTTCATCTTCACAACCACCTTCATCATTCTCTAACTGGAACATTCATGATACTAATCCATGCAAATGGACCTCCATAACATGTTCATCACTCTCTTTTGTAACTGAAATCAATATTCAATCCATTCCTCTTCAACTTCCTATACCTTCTAATCTTTCATCATTTCCTTATCTTAACAAACTTGTCATTTCGGATTCGAATCTCACTGGAACTATTCCTTTTGACATTGGTGATTGTTCTTCACTCACTGTTATTGATCTTAGCTTTAACAATCTTGTTGGTTCTATTCCTTCAAGTATTGGAAAGTTAGAGAGTCTAGTGAACTTGTCTTTGAATTCGAACCAACTTACCGGAAAAATTCCCGATGAGATAAGTACTTGCATTAGTCTCAGAAATCTTCACCTTTTTGATAATCAGTTAAGTGGAATCATCCCGAATTCGCTTGGAAAGTTGTCGAAACTCGAAGTCCTTAGAGCAGGTGGAAACAAAGATATAATTGGGAAGATTCCAGAAGAGATTGGAGAATGTAGTAATTTGACAGTTTTAGGTCTTGCTGATACAAGAATATCAGGTTCTTTACCTGTTTCTTTTGGTAAACTTCAAAAGCTTAAAACTTTGTCAATTTATACAACAATGTTATCAGGTGAAATTCCTAAAGAGTTAGGTAACTGTTCTGAACTTATTGATTTGTTTCTATATGAAAATAGCTTATCAGGATCTATACCATCAGAGATTGGTAAGCTAAAGAAGCTTGAACAGTTGTTTTTATGGCAGAATGGTCTTGTTGGTGCTATTCCAAATGAGATTGGTAATTGTTCAAGTTTGAGAAACATTGATCTAAGTTTGAATTCTTTATCTGGTACTATACCTTTATCTTTAGGAGGTCTTTTAGAGCTTGAAGAGTTTATGATTAGTGATAATAATGTATCTGGTTCTATTCCTTCAACTCTTTCAAATGCTGAAAAGCTTCAACAGTTGCAAGTTGATACAAATCAGCTTTCAGGTTTGATTCCACCTGAGATTGGAAAGTTGTCAAATCTTTTAGTGTTTTTTGCTTGGCAGAATCAGCTTGAAGGAAGCATTCCTTCAAGTTTAGGAAACTGTAGTAAGCTTCAAGCACTTGATTTGTCTAGAAATTCACTCACTGGTAGTATTCCTTCTGGATTATTTCAGCTTCAAAACCTCACAAAACTGCTTCTGATTTCAAATGATATATCTGGTTCTATACCATTAGAAATTGGTAGTTGCATGTCACTTATAAGGTTGAGGCTTGGAAACAATAGGATTACTGGAAGCATTCCTAAGACCATAGGAAGTCTTAAGAATTTAAACTTTTTAGATCTCTCTGGGAACCGGCTTTCTGGGCCGGTTCCCGATGAAATAAGAAGCTGCATACAACTCCAAATGATTGACTTCAGTACTAACAACTTGGAAGGCTCACTTCCTAATTCCTTGTCGTCATTATCGTCGCTTCAGGTATTGGATGTTTCTTTTAACAAGTTTTCAGGTCCGTTGCCGGCGAGTTTAGGTCGTCTTGTTTCTCTGAGTAAGTTAATCTTAGGGAATAACTTGTTTTCTGGGCCAATTCCTTCATCGGTAAGCTTATGTTCAAATCTCCAACTTCTTGATCTTAGTAGCAATCAGCTCACTGGAAGCATACCGGCCGAATTAGGCCAAATCGAAGCTCTAGAAATCGCTCTCAATCTTAGTTGCAATTTACTAAGTGGAACAATACCACCTCAGATATCTGCTCTTAACAAGCTTTCCATTTTAGACATTTCACATAACCAGTTAGAAGGAGATTTGCAAACTCTTGCAGAGCTAGATAACCTTGTTTCCCTCAATGTTTCTTACAACAAGTTCACAGGATATCTTCCAGATAACAAGCTTTTCAGACAGTTAACAACGAAAGACCTTACCGGAAATCAAGGACTTTGCACTTCAGGTCAGGAACTATGTTTTGTAAAGGATTCTAGCAAGACCGATATGGCGTTGAATGAGCACGAGGTAAGGAAATCGCGAAGGATTAAGCTAGCAATTGGACTGCTGATAGCATTAACAGTTGTAATGATACTTATGGGGATAACTGCTGTGGTCAAAGCAAGAAGAACCATTCGAGATGATGATTCGGAATTAGGAGACTCATGGCCATGGCAATTCATACCATTCCAGAAGCTAAACTTTTCAGTTGAACAAGTACTGAGATGTTTGATTGATAGGAATATAATCGGCAGGGGATGTTCCGGTGTTGTTTATCGAGGTGAAATGGATAACGGCGAATTCATTGCAGTGAAGAAACTGTGGCCTATAACAGTTGATGAAGGAGAGACATTGAAGGATTACAAAAGTGGAGTTCGAGATTCATTCTCGGCTGAAGTCAAGTGTCTTGGTTCGATTCGTCATAAGAACATTGTTAGGTTCTTAGGTTGTTGTTGGAACAAGAAAACAAGATTGCTTATTTTTGATTATATGCCAAATGGAAGTTTAAGCAGTGTACTTCATGAGAGGACTGGAAATTCTCTGGATTGGGAACTTAGGTTCCGAATTCTGTTAGGTTCTGCAGAAGGACTCGCGTATCTACATCATGACTGTGTTCCTCCAATAGTCCACAGAGATATTAAAGCCAATAACATCTTAATTGGCCTTGAATTTGAACCTTATATTGCGGATTTTGGCTTAGCTAAGCTTGTTGATGATGGTGATGTTGGTCGTTCTTCCAATACCGTTGCTGGTTCATATGGATACATTGCTCCAGAATATGGTTATATGATGAAGATCACGGAGAAGAGCGACGTTTATAGCTACGGTGTAGTTTTGCTAGAAGTCTTGACTGGCAAGCAACCAATAGATCCAACAATACCAGATGGTTTACATGTTGTTGATTGGGTGAGACAGAAAAGAGGTCTTGAAGTACTTGATCCTACCTTACTTTCAAGACCGGAATCGGAAATAGAAGAAATGATCCAAGCATTAGGAATAGCCCTATTGTGTGTAAATTCATCTCCTGATGAAAGACCAACAATGAGAGATATAGCAGCAATGCTCAAAGAGATAAAGCATGAAAGAGAAGAATATGCAAAATTTGATGTGCTTTTAAAAGGGTCTCCAGCAAATGATGCAAAAGTTCTTGCAACATCTTCAAATGCATCAGTGATGCAAACATTGAATACAAAAAGCAATAATACAAGTTTCTCTGTGTCTTCACTACTTCATTCATCTTCAAGTTCCAAGCTGAGTTTCAAATGA 3405 0.3733 MFSLFSMLNSSSSSSSSPSSFFSIIILIQTTLLFSFSFSSSNNEATILFTWLHSSSSQPPSSFSNWNIHDTNPCKWTSITCSSLSFVTEINIQSIPLQLPIPSNLSSFPYLNKLVISDSNLTGTIPFDIGDCSSLTVIDLSFNNLVGSIPSSIGKLESLVNLSLNSNQLTGKIPDEISTCISLRNLHLFDNQLSGIIPNSLGKLSKLEVLRAGGNKDIIGKIPEEIGECSNLTVLGLADTRISGSLPVSFGKLQKLKTLSIYTTMLSGEIPKELGNCSELIDLFLYENSLSGSIPSEIGKLKKLEQLFLWQNGLVGAIPNEIGNCSSLRNIDLSLNSLSGTIPLSLGGLLELEEFMISDNNVSGSIPSTLSNAEKLQQLQVDTNQLSGLIPPEIGKLSNLLVFFAWQNQLEGSIPSSLGNCSKLQALDLSRNSLTGSIPSGLFQLQNLTKLLLISNDISGSIPLEIGSCMSLIRLRLGNNRITGSIPKTIGSLKNLNFLDLSGNRLSGPVPDEIRSCIQLQMIDFSTNNLEGSLPNSLSSLSSLQVLDVSFNKFSGPLPASLGRLVSLSKLILGNNLFSGPIPSSVSLCSNLQLLDLSSNQLTGSIPAELGQIEALEIALNLSCNLLSGTIPPQISALNKLSILDISHNQLEGDLQTLAELDNLVSLNVSYNKFTGYLPDNKLFRQLTTKDLTGNQGLCTSGQELCFVKDSSKTDMALNEHEVRKSRRIKLAIGLLIALTVVMILMGITAVVKARRTIRDDDSELGDSWPWQFIPFQKLNFSVEQVLRCLIDRNIIGRGCSGVVYRGEMDNGEFIAVKKLWPITVDEGETLKDYKSGVRDSFSAEVKCLGSIRHKNIVRFLGCCWNKKTRLLIFDYMPNGSLSSVLHERTGNSLDWELRFRILLGSAEGLAYLHHDCVPPIVHRDIKANNILIGLEFEPYIADFGLAKLVDDGDVGRSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVLLEVLTGKQPIDPTIPDGLHVVDWVRQKRGLEVLDPTLLSRPESEIEEMIQALGIALLCVNSSPDERPTMRDIAAMLKEIKHEREEYAKFDVLLKGSPANDAKVLATSSNASVMQTLNTKSNNTSFSVSSLLHSSSSSKLSFK* 1135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g2114 1134 Gene3D Phosphorylase Kinase; domain 1 777 876 - -
Tpr2g2114 1134 SMART LRR_typ_2 301 325 IPR003591 -
Tpr2g2114 1134 SMART LRR_typ_2 156 180 IPR003591 -
Tpr2g2114 1134 SMART LRR_typ_2 541 565 IPR003591 -
Tpr2g2114 1134 SMART LRR_typ_2 589 613 IPR003591 -
Tpr2g2114 1134 SMART LRR_typ_2 661 686 IPR003591 -
Tpr2g2114 1134 SMART LRR_typ_2 493 517 IPR003591 -
Tpr2g2114 1134 SMART LRR_typ_2 421 445 IPR003591 -
Tpr2g2114 1134 Gene3D Ribonuclease Inhibitor 196 296 IPR032675 -
Tpr2g2114 1134 SUPERFAMILY L domain-like 390 706 - -
Tpr2g2114 1134 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 15 1127 - -
Tpr2g2114 1134 Pfam Leucine rich repeat N-terminal domain 42 82 IPR013210 -
Tpr2g2114 1134 Gene3D Ribonuclease Inhibitor 445 708 IPR032675 -
Tpr2g2114 1134 ProSiteProfiles Protein kinase domain profile. 790 1076 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr2g2114 1134 Gene3D Transferase(Phosphotransferase) domain 1 877 1086 - -
Tpr2g2114 1134 SMART serkin_6 790 1072 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr2g2114 1134 Gene3D Ribonuclease Inhibitor 40 195 IPR032675 -
Tpr2g2114 1134 ProSiteProfiles Leucine-rich repeat profile. 640 662 IPR001611 GO:0005515
Tpr2g2114 1134 SUPERFAMILY L domain-like 52 407 - -
Tpr2g2114 1134 Gene3D Ribonuclease Inhibitor 303 373 IPR032675 -
Tpr2g2114 1134 Gene3D Ribonuclease Inhibitor 374 444 IPR032675 -
Tpr2g2114 1134 ProSitePatterns Protein kinases ATP-binding region signature. 796 819 IPR017441 GO:0005524
Tpr2g2114 1134 ProSitePatterns Serine/Threonine protein kinases active-site signature. 921 933 IPR008271 GO:0004672|GO:0006468
Tpr2g2114 1134 Pfam Protein tyrosine and serine/threonine kinase 794 1067 IPR001245 GO:0004672|GO:0006468
Tpr2g2114 1134 PRINTS Leucine-rich repeat signature 424 437 - -
Tpr2g2114 1134 PRINTS Leucine-rich repeat signature 493 506 - -
Tpr2g2114 1134 PANTHER RECEPTOR-LIKE PROTEIN KINASE 2 15 1127 - -
Tpr2g2114 1134 SUPERFAMILY Protein kinase-like (PK-like) 768 1069 IPR011009 -
Tpr2g2114 1134 Pfam Leucine rich repeat 109 169 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g2114 Tpr-Chr2 25235213 25239742 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g2114 62 1087 Receptor kinase-like Gene Family AT5G56040 49.280 0.0 971
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Tpr2g2114 PK_Tyr_Ser-Thr 7.3e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g2114 - - mtr:MTR_5g045910 1934.07