Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g2081 ATGGCGAAAAAACTTTTGAAATTGAATGTTCCATGTAGAAGAAGATCATTCTCCTCTGAAACTCCCTCTCTTTACTCATTCCTTCAACCTTGTTTGTTTTCCATCAACAACAACAAATCTCATGTTTATGATGATGATAATGAACCCCAAAATCTCCCAACTTCAGCACCACAATCACTCTCTCTCACACCTAACCAACTTACTACTCTTCAAACAACTCTCCACAAATCCCTCATCACTACTCAAACTGATGAAGCTTGGAAATCATTCAAAACCCTCACTACCCACCATTCCTTCCCACCTAAACCCCTCACCAATTCCCTTCTCACCCACTTATCCTCTCTTGGTGACATTCACAATCTCAAAAGAGCTTTTGCATCTACCATCTTTCTCATTCAAAAGAATCCCAACCTTCTCCATTTCGATACAATCCATACCATACTTCTTTCAATGAAGTCTGCCAACACTGCTTCCCCTGCTTTTGCACTTGTTAAGACAATGTTCAAAAACAGATTTTTTATTCCTTTTCATTCGTGGGGCAGTCTGCTCGTTGATATTGCTAGGAACAATGGTAACCTTGCTGCTTTCTTGCCTCTTTTTGAAGAGAATTGCAGGGTTGCTTTCGATGAGAAGTTGAATTTCATGATGCCTGATGTTTCTGCTTGTAATGCTGCTCTTGAAGCTTGCTGTTTTCACCTTGAATCGGTAAGCGATGCTGAGAGAGTTGTTGGAATAATGTCAAATCTTAGTGTTAAGCCTGATGAGTTTAGTTTTGGATTTCTTGCTTATTTATATGCACTTAAAGGTTTACAAGATAAGATAGATGAGTTAAAAGTTTTGATGACTGGTTTTGGTTACTCAAAAAACTATAAATGCTTTTATTCTAATTTGATTAGTGGGTATGTTAAGTCTGGTAATTTAGCTTTTGTGGAGTCGACTATTCTGAGTAGTCTGAATGATCGAGATGGGGGGGAAGTTTGGAAATTTGATAGAGACACTTTTTGTTTAGTAATTAAGGAATATCTTCAGAAGGGAAATATTAAGGGTTTAGCTAATTTGATTATTGAAGCTCAGAAATTAGAGTCTTCAAATATCAAAGTTGATGAGTCTATAGGTTTTGGTATTGTTAATGCATGTGTTAGTATTGGACTTTCGGATAAAGCACACAGTATTCTTGATGAAATGAATGCTTTGGGAGGCTCGGTGGGTCTTGGGGTCTATGTACCCATCTTAAAGGCTTACTGCAAAGAAAATCGAACTGCTGAGGCTACTCTATTGGTGGTGGATATTAGTAGTTCTGGTCTTCGGTTGGATGTGGAAACCTACGATGCTCTGATAGAAACGTCCATGTCCGGTCAAGACTTTCAGTCGGTCTTTTCTCTGTTTAGGGACATGAGAGAGGCGAGGGTTCTTGATTTGAAAGGGAGTTACTTGACTATAATGACAGGTTTGATGGAGAATAATCGACCTGAGTTGATGGCAGCTTTCTTAGATGAAGTGGCTGAGGATCCTCGTATTGAAGTTGGTACTCACGATTGGAATTCTATAATCCACGCTTTTTGTAAAGCTGGGAGACTAGAAGATGCACGGAGGACTTTCCGAAGGATGACATTCCTGCAATTTGAGCCAAATGATCAGACATACTTGTCACTGATTAACGGATATGTTTCGGCACAGAAATATTTTGATGTAATGATGTTGTGGAATGAGGTTAAGCGCAAGTTATCGGTGGATGGACCAAAGCGGATCAAATTTGACCAAAATCTGGTTGATGCATTCCTGTATGCTATGGTCAAGGGAGGTTTCTTTGATGCTGTGATGCAAGTTGTGGAGAAATCTAAAGAGATGAAAATATTTGTTGATAAGTGGAGATACAAACAAGCATTCATGGAGACCCATAAAAAGCTCAAAGTGGCCAGGTTAAGAAAAAAGAATATTAGAAAAATGGAAGCGCTTATTGCTTTCAAGAATTGGGCTGGCTTAAATGCGTGA 1992 0.3896 MAKKLLKLNVPCRRRSFSSETPSLYSFLQPCLFSINNNKSHVYDDDNEPQNLPTSAPQSLSLTPNQLTTLQTTLHKSLITTQTDEAWKSFKTLTTHHSFPPKPLTNSLLTHLSSLGDIHNLKRAFASTIFLIQKNPNLLHFDTIHTILLSMKSANTASPAFALVKTMFKNRFFIPFHSWGSLLVDIARNNGNLAAFLPLFEENCRVAFDEKLNFMMPDVSACNAALEACCFHLESVSDAERVVGIMSNLSVKPDEFSFGFLAYLYALKGLQDKIDELKVLMTGFGYSKNYKCFYSNLISGYVKSGNLAFVESTILSSLNDRDGGEVWKFDRDTFCLVIKEYLQKGNIKGLANLIIEAQKLESSNIKVDESIGFGIVNACVSIGLSDKAHSILDEMNALGGSVGLGVYVPILKAYCKENRTAEATLLVVDISSSGLRLDVETYDALIETSMSGQDFQSVFSLFRDMREARVLDLKGSYLTIMTGLMENNRPELMAAFLDEVAEDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMTFLQFEPNDQTYLSLINGYVSAQKYFDVMMLWNEVKRKLSVDGPKRIKFDQNLVDAFLYAMVKGGFFDAVMQVVEKSKEMKIFVDKWRYKQAFMETHKKLKVARLRKKNIRKMEALIAFKNWAGLNA* 664
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g2081 663 Pfam Pentacotripeptide-repeat region of PRORP 358 474 IPR033443 -
Tpr2g2081 663 PANTHER OS01G0788900 PROTEIN 1 663 - -
Tpr2g2081 663 Pfam PPR repeat family 513 556 IPR002885 -
Tpr2g2081 663 Gene3D Tetratricopeptide repeat domain 312 468 IPR011990 GO:0005515
Tpr2g2081 663 Gene3D Tetratricopeptide repeat domain 469 635 IPR011990 GO:0005515
Tpr2g2081 663 TIGRFAM PPR: pentatricopeptide repeat domain 513 544 IPR002885 -
Tpr2g2081 663 Gene3D Tetratricopeptide repeat domain 55 292 IPR011990 GO:0005515
Tpr2g2081 663 PANTHER BNAC05G43320D PROTEIN 1 663 - -
Tpr2g2081 663 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 509 543 IPR002885 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g2081 Tpr-Chr2 24902532 24909797 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g2081 386 574 Miscellaneous Gene Families AT4G11690 23.810 3.45e-13 70.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g2081 - - mtr:MTR_5g044930 1139.02
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g2081 2 24902532 24909797 Tpr2g2081 2 24902532 24909797 ECH