Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g2072 ATGTCTTCTGTAACCAACCCAGTTCTCATATCAGTTCAAAGACCTCAAATTTCTGCACTTTTTTTGTTACCTAAAAGAGTTTCAACTTCAACAAGTTATGGATTGTTGAAATCTAGAACAGTACTTCAACATGAGGCTACAAATTCAAGCTTATCTTTCTCTCCATTGGTGAAAGGTTTGAGATTAAGAGAAAGAAGGTTTCCGGTTGTTGCAGCCTTAGCAGCAGATGCTGATGATAGTGAAATTGGAATCACTAAAGGGTCTGTCCAATCCTCAAAGAGTTTTGGAGAGAAATTTCCTGCATTGGTTACTGGTTTCTTTTTCTTTATGTGGTACTTCTTAAATGTGATTTTCAACATACTCAACAAGAAAGTCTACAATTATTTTCCATATCCATATTTTGTTTCTGTTGTACATCTCCTTGTAGGGGTGGTATATTGCCTTATTAGCTGGGGTGTAGGCCTACCAAAACGTGCACCAATGAATAAGGAGCTCTTGCTTCTATTGACTCCAGTTGCATTTTGTCATGCCCTTGGTCATGTCATGTCTAATGTATCATTTGCTGCTGTTGCTGTGTCTTTTACACATACTATAAAAGCTTTGGAGCCATTTTTCAATGCTTCAGCTTCTCAGTTTGTGTTAGGCCAACATATTCCTCTGTCTCTGTGGCTATCTTTGACTCCTGTTGTTCTAGGTGTATCAATGGCATCACTAACTGAACTATCTTTCAACTGGACTGGTTTCATTAGTGCTATGATTTCAAATATAGCATTTACATACAGAAGTTTATATTCTAAGAAAGCAATGACTGGAATGGACAGTACAAATGTATATGCGTATATTTCAGTGATCGCACTCGCCTTTTGTATCCCGCCAGCAATACTTATTGAGGGACCCCAACTAATGGAATTTGGATTTAAAAATGCTATTGCCAAAGTAGGACTGATCAAGTTTTTGTCTGATCTTTTCTGGATTGGAATGTTTTACCATCTTTATAATCAGCTTGCTACTAATACTTTGGAACGTGTTGCACCACTAACACATGCAGTTGGAAATGTGTTGAAGAGAGTTTTTGTCATTGGATTCTCCATAGTAGTTTTTGGCAACACAATATCCACACAAACTGGCATTGGCACTGCTATTGCAATTGCAGGTGTTGCTGTCTATTCTCTAATAAAAGCAAACATGGAAGAGCAAAAACGGAAAGCTGCTGCAGCCCTTGCATCTTAA 1230 0.3789 MSSVTNPVLISVQRPQISALFLLPKRVSTSTSYGLLKSRTVLQHEATNSSLSFSPLVKGLRLRERRFPVVAALAADADDSEIGITKGSVQSSKSFGEKFPALVTGFFFFMWYFLNVIFNILNKKVYNYFPYPYFVSVVHLLVGVVYCLISWGVGLPKRAPMNKELLLLLTPVAFCHALGHVMSNVSFAAVAVSFTHTIKALEPFFNASASQFVLGQHIPLSLWLSLTPVVLGVSMASLTELSFNWTGFISAMISNIAFTYRSLYSKKAMTGMDSTNVYAYISVIALAFCIPPAILIEGPQLMEFGFKNAIAKVGLIKFLSDLFWIGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSIVVFGNTISTQTGIGTAIAIAGVAVYSLIKANMEEQKRKAAAALAS* 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g2072 409 Pfam Triose-phosphate Transporter family 103 390 IPR004853 -
Tpr2g2072 409 PANTHER SOLUTE CARRIER FAMILY 35 51 398 - -
Tpr2g2072 409 PANTHER TRIOSE PHOSPHATE/PHOSPHATE TRANSLOCATOR, CHLOROPLASTIC-LIKE ISOFORM X1 51 398 - -
Tpr2g2072 409 TIGRFAM tpt: Tpt phosphate/phosphoenolpyruvate translocator 102 400 IPR004696 GO:0016021|GO:0022857|GO:0055085
Tpr2g2072 409 Coils Coil 393 409 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g2072 Tpr-Chr2 24814951 24819124 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g2072 54 401 Antiporters AT5G46110 75.783 0.0 545
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g2072 K15283 - pvy:116132902 596.275
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g2072 2 24814951 24819124 Tpr2g2072 2 24814951 24819124 ECH