Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g2066 ATGTCCGCTGAAAAAGAGAGAGAGACCCAAGTTTACTTGGCCAAGCTTTCTGAACAGGCTGAAAGATATGAAGAAATGGTCGAATGTATGAAGAAAGTGGCAAAACTTGATGTTGAACTAACTGTGGAAGAGAGGAACCTCCTCTCGGTTGGATATAAAAATGTCATTGGTGCACGAAGAGCCTCATGGCGCATTATGTCATCAATTGAGCAGAAGGAAGAGTCCAAGGGTAATGAGCACAATGTTAAACTGATCAAGAGTTACTGCCAAAAGGTTGAGGAGGAACTCTCCAAAATCTGCGGTGACATTCTGACTATTATAGACCAGCATTTGGTTCCTTCCTCCACCTCAGCCGAAGCTAATGTTTTCTACCATAAGATGAAAGGTGATTACTTCCGGTATCTTGCTGAGTTCAAGACTGACCAAGAGAGGAAAGAGGCTGCCGAGCAGTCACTGAAAGGATATGAGGCTGCTTCAGCCACTGCAAACACTGATCTTCCATCAACACATCCAATTCGTCTTGGACTCGCACTCAACTTCTCTGTCTTTTATTATGAGATCATGAACTCTCCTGAAAGGGCCTGCCATTTGGCCAAACAAGCTTTTGATGAGGCGATTGCAGAGTTGGATACCTTGAGTGAAGAGTCCTACAAGGACAGCACTTTGATCATGCAGTTGTTGAGAGACAACCTGACTCTCTGGACCTCTGATTTGCCAGAGGATGGAGGTGAGGATAACGTAAAAGCTGAAGAAGCCAAACCTGCTGAACCTGAGCATTGA 780 0.4474 MSAEKERETQVYLAKLSEQAERYEEMVECMKKVAKLDVELTVEERNLLSVGYKNVIGARRASWRIMSSIEQKEESKGNEHNVKLIKSYCQKVEEELSKICGDILTIIDQHLVPSSTSAEANVFYHKMKGDYFRYLAEFKTDQERKEAAEQSLKGYEAASATANTDLPSTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDLPEDGGEDNVKAEEAKPAEPEH* 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g2066 259 Coils Coil 13 33 - -
Tpr2g2066 259 ProSitePatterns 14-3-3 proteins signature 1. 45 55 IPR023409 -
Tpr2g2066 259 ProSitePatterns 14-3-3 proteins signature 2. 217 236 IPR023409 -
Tpr2g2066 259 PIRSF 14-3-3 1 248 IPR000308 -
Tpr2g2066 259 SUPERFAMILY 14-3-3 protein 6 237 IPR036815 -
Tpr2g2066 259 Coils Coil 195 215 - -
Tpr2g2066 259 MobiDBLite consensus disorder prediction 241 259 - -
Tpr2g2066 259 PANTHER BNAC03G57490D PROTEIN 3 254 - -
Tpr2g2066 259 SMART 1433_4 7 248 IPR023410 -
Tpr2g2066 259 PRINTS 14-3-3 protein zeta signature 39 68 IPR000308 -
Tpr2g2066 259 PRINTS 14-3-3 protein zeta signature 88 112 IPR000308 -
Tpr2g2066 259 PRINTS 14-3-3 protein zeta signature 119 141 IPR000308 -
Tpr2g2066 259 PRINTS 14-3-3 protein zeta signature 154 180 IPR000308 -
Tpr2g2066 259 PRINTS 14-3-3 protein zeta signature 181 207 IPR000308 -
Tpr2g2066 259 PRINTS 14-3-3 protein zeta signature 208 237 IPR000308 -
Tpr2g2066 259 MobiDBLite consensus disorder prediction 237 259 - -
Tpr2g2066 259 Pfam 14-3-3 protein 13 235 IPR023410 -
Tpr2g2066 259 PANTHER 14-3-3 PROTEIN 3 254 IPR000308 -
Tpr2g2066 259 Gene3D - 1 249 IPR036815 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g2066 Tpr-Chr2 24763006 24767388 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g2066 2 256 14-3-3 family AT1G26480 84.615 1.35e-164 454
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g2066 - K06630 gmx:100529130 476.092
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g2066 2 24763006 24767388 Tpr2g2066 2 24763006 24767388 ECH
Tpr2g3712 2 40168743 40173899 Tpr2g2066 2 24763006 24767388 PCT