Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g2029 ATGGACCGACCACCGTGGAATGAAGAAGAACAGGCAGTTGACGGTGGTGAAGGGGGACTACCTCCAAGACACAGTTTGACTTTGCCACCACATATGGATAACCTTTTTAGCGGTGGTTTTAGCCCTGGTCCTATGACTCTGCTTTCTAATTTATTGACTGAAGGTGAAGATGGTAAGTCTTTCTCCCAGCTTCTCGCCGGTGCCATGGCGTCTCCGGCAACAGGAACAGCTGCTTTGCTTGATTCACCTGGATTTTTTTCACATCCTCAGGTGTCTTTTGGAATGTCACACCAGCAGCAGGCACTGGCACAGGTCTCGGCTCAAGAACAATCCATCACAAATATGAATAACCAAGCTGGACATTCAATGTCTGTATCAGCATCCATCGATCACGCTCCTCTCTCCGAACAAAGGCAACAGTCTTCTTCATCGAATGTTGATAAGCCGGCTGATGATGGTTACAATTGGAGGAAGTATGGACAGAAACACGTGAAAGGTAGCGAGTTTCCTCGAAGTTATTATAAGTGCACACATCCTAGCTGTCCTGTCAAGAAAAAAGTTGAGCGCTCACTTGCTGGTCATGTTACTGCGATTATTTATAAAGGAGAGCACAATCATCAGCGTCCGAGTAACAAGCGATCAAAAGATACTATAACTTCAAATGACAGTTCAAATATGCAAGGGAATGCTGATTCGTCTTATCAAGGGATGATGGATCCGGAATCTAGTCAGGCAACAGGTGAACATATATCCGGAACAAGCGACAGTGAGGAAATTGGTGATCATGGAGCTGAAGTGGATGAGAAAAGAGTTGAGCCTGACCCCAAAAGGAGAAATACAGAAATTGTGGTCTCTGATCCTACAGCTTCTTCACATAGGACTGTAGCAGAGTCTAGAATCATCGTGCAAACAACTAGTGAAGTGGATCTTTTAGATGATGGTTATCGATGGAGAAAATATGGACAAAAAGTTGTCAAAGGCAACCCTTATCCTAGGAGCTATTACAAATGTACAACACAGGGTTGTAACGTTCGAAAGCACGTAGAGAGGGCTTCGACGGATCCTAAAGCAGTTATAACAACATACGAAGGGAAACATAATCATGATGTACCTGCAGCTAAGACTAATAGCCACACTATTGCCAACAACAATGCTTCACAGTTAAGATCACAAAATAACATCTCCGAGAAACCTAATTTTGGCAGCATTGGTATTGGCGGCAGTAATGAGCAACAACCAGTTGCTCGTCTAATGCTGAAAGAAGAGCGGATAACTTAA 1278 0.439 MDRPPWNEEEQAVDGGEGGLPPRHSLTLPPHMDNLFSGGFSPGPMTLLSNLLTEGEDGKSFSQLLAGAMASPATGTAALLDSPGFFSHPQVSFGMSHQQQALAQVSAQEQSITNMNNQAGHSMSVSASIDHAPLSEQRQQSSSSNVDKPADDGYNWRKYGQKHVKGSEFPRSYYKCTHPSCPVKKKVERSLAGHVTAIIYKGEHNHQRPSNKRSKDTITSNDSSNMQGNADSSYQGMMDPESSQATGEHISGTSDSEEIGDHGAEVDEKRVEPDPKRRNTEIVVSDPTASSHRTVAESRIIVQTTSEVDLLDDGYRWRKYGQKVVKGNPYPRSYYKCTTQGCNVRKHVERASTDPKAVITTYEGKHNHDVPAAKTNSHTIANNNASQLRSQNNISEKPNFGSIGIGGSNEQQPVARLMLKEERIT* 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g2029 425 Pfam WRKY DNA -binding domain 312 369 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tpr2g2029 425 Pfam WRKY DNA -binding domain 151 207 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tpr2g2029 425 PANTHER WRKY TRANSCRIPTION FACTOR 58-RELATED 141 424 - -
Tpr2g2029 425 PANTHER WRKY TRANSCRIPTION FACTOR 58-RELATED 76 139 - -
Tpr2g2029 425 SUPERFAMILY WRKY DNA-binding domain 149 209 IPR036576 GO:0003700|GO:0006355|GO:0043565
Tpr2g2029 425 MobiDBLite consensus disorder prediction 216 253 - -
Tpr2g2029 425 ProSiteProfiles WRKY domain profile. 151 209 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tpr2g2029 425 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 141 424 IPR044810 GO:0003700
Tpr2g2029 425 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 76 139 IPR044810 GO:0003700
Tpr2g2029 425 Gene3D WRKY domain 296 372 IPR036576 GO:0003700|GO:0006355|GO:0043565
Tpr2g2029 425 Gene3D WRKY domain 135 210 IPR036576 GO:0003700|GO:0006355|GO:0043565
Tpr2g2029 425 MobiDBLite consensus disorder prediction 132 154 - -
Tpr2g2029 425 SMART WRKY_cls 150 208 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tpr2g2029 425 SMART WRKY_cls 311 370 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tpr2g2029 425 MobiDBLite consensus disorder prediction 132 149 - -
Tpr2g2029 425 MobiDBLite consensus disorder prediction 199 279 - -
Tpr2g2029 425 MobiDBLite consensus disorder prediction 254 279 - -
Tpr2g2029 425 ProSiteProfiles WRKY domain profile. 306 371 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tpr2g2029 425 SUPERFAMILY WRKY DNA-binding domain 303 371 IPR036576 GO:0003700|GO:0006355|GO:0043565
Tpr2g2029 425 MobiDBLite consensus disorder prediction 1 21 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g2029 Tpr-Chr2 24363554 24366677 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g2029 20 65 WRKY Transcription Factor Family AT2G03340 56.250 1.34e-07 51.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Tpr2g2029 WRKY 1.2e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g2029 - - gmx:100127369 605.52