Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g2026 ATGGAGAGCACAAGATTATGCCAATGGTTAAAGTTAAATCTTGTGGTGATTGCATTAGTATTTTTAAAGGCAGAAGCTGGTTTTGCACCAATCACTATTGTCCAAAGCGCAGTAGCAAAAGGAGCTGTTTGTTTGGATGGTAGTCCACCAGCTTACAATTTTCAGAAGGGATATGGAACAGGAATTAACAGTTGGTTAGTTCATATGGAGGGAGGAGGATGGTGCCATAATGCCACTACTTGCCTTGCTCGTAAGACGACTCGTTTAGGTTCATCGACAAAAATGGGAGATACACTTGCATTTTCAGGAATTTTAAATGACAACAAACAATTTAATCCAGATTTCTACAATTGGAACAGAATTAAGGTTAGATATTGTGATGGTTCATCTTTTACTGGTGATGTGGAAGCAGTCAATCCAGAAACTAAGTTGCACTTTAGAGGAGCAAGAATTTTTGAAGCTGTCATGGAGGATTTACTAGCAAAAGGAATGAAAAATGCTCAAAATGCTATCATCTCAGGATGTTCAGCTGGAGGATTAACTTCATTACTGCATTGCGATCGTTTTCGAGCTCTTCTTCCCAGAGGAGCTAAAGTGAAATGTATCTCAGATGCCGGTTACTTTATCAATGTAAAAGATTTATCAGGAGCACAAACCATTGAGCAATTCTTCAATCAAGTTGTTACCACACATGGGTCTACAAAGAATTTACCTAGATCATGCACTTCAAAACTCAAACCAGAGCTGTGCTTTTTCCCTCAATATTTTGTATCACAAATCACTACACCAATCTTCTTTGTAAATTCGGAAATCGACTCATGGCAGATTAAAAACATTTTGACGCCGCATATGGCTGATTGGCGTGAATGCAAGCTAGATATAAAGAAATGCACTCCTACTCAACTAAATCAAATCAATGGCTTTAGAACAGAATTCCTAAAAGCAATAACTCCTATAGGCAACTCTCCATCCAAAGGAATGTTCTTAAACTCTTGCTATAACCACTGTCAAACCGAACTGCAGGAACTATGGTTGTATAGTGGCTCTCCATTGTTGGCCAAGACACCGATTGCAAAAGCGGTAGCAGACTGGTTTTATGACAGAAGCCCTTTCCATCAGATAGATTGTGCTTATCCCTGCAACCCAACTTGTGGTAACCACGTTCTTGAAGTTCTAAAGGAAGATGATCTAGAACTATAA 1200 0.39 MESTRLCQWLKLNLVVIALVFLKAEAGFAPITIVQSAVAKGAVCLDGSPPAYNFQKGYGTGINSWLVHMEGGGWCHNATTCLARKTTRLGSSTKMGDTLAFSGILNDNKQFNPDFYNWNRIKVRYCDGSSFTGDVEAVNPETKLHFRGARIFEAVMEDLLAKGMKNAQNAIISGCSAGGLTSLLHCDRFRALLPRGAKVKCISDAGYFINVKDLSGAQTIEQFFNQVVTTHGSTKNLPRSCTSKLKPELCFFPQYFVSQITTPIFFVNSEIDSWQIKNILTPHMADWRECKLDIKKCTPTQLNQINGFRTEFLKAITPIGNSPSKGMFLNSCYNHCQTELQELWLYSGSPLLAKTPIAKAVADWFYDRSPFHQIDCAYPCNPTCGNHVLEVLKEDDLEL* 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g2026 399 PANTHER PECTIN ACETYLESTERASE 3 392 - -
Tpr2g2026 399 Pfam Pectinacetylesterase 23 370 IPR004963 GO:0016787
Tpr2g2026 399 PANTHER NOTUM-RELATED 3 392 IPR004963 GO:0016787
Tpr2g2026 399 SUPERFAMILY alpha/beta-Hydrolases 149 274 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g2026 Tpr-Chr2 24311750 24314983 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g2026 5 392 Carbohydrate Esterase AT4G19420 57.611 0.0 518
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g2026 K19882 - gmx:100818146 615.535