Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g2024 ATGGAACAACAAACACAAGACTCAACCAACAACACTAACCAAAATCACACAACAAAAACAACAACAACCTTAATCAAAACAAATGGAACAACAAACTCTTATCAACATCATCATCATCATCATCATCATCAATATTATCAACAACAACATCATCAACAACATCAAAATCAACTTCAACAATACTCAACTCAACTTGGTTTCTTCAACTATCAAAGATATTACCCTGCTCTTCTTCCTTTACCTTCACTTCAACAACTACCTTTGATTCCATCTTTTCCTCAAAATCAAAACTTTAAACTAAAAACCCATTTGCATAAACTTCCATGCAAACTCAATACTTCTCCTTCATCAAATTACAATCTTTCTCAGCTATCACTTGCTCCTGCTCCAAAGGAACTTCAGAAGCAAACTAAATCATCCTTTAAAGAAGTTGAAGAGAAGAAGCTGATTTCAACAAGGAAGCCACAAGAAGTGATTGTTGCAAGAAGGCCAGACTCAGGTGGACAAGAAGGTCATGTGATTTCTCTCCTTGCAAACCACTTTTTGGTGAAGTTTGATTCATCACAAAAAATATATCATTACAATGTTGAAATTACTCCTCATCCCTCTAAAGATGTTGCTAGAGCAATCAAACATAAATTGGTACATAACAATTCCGAGATTTTATCTAGCGCTTTGCCGGCGTATGATGGGAGGAAGAATCTTTATAGTCCAATTGAATTCCAAAATGATAAGCTTGAGTTCTACATAAGCCTCCCAATCCCAACTAGCAAATCAACGTCATTTTACGGAGAAACGAATGATACGAATGAGAAGCACGAACAGCATAAACTTTTTCGGATAAATATCAAACTAGTCTCGAAGATTGATGGAAAGGAGTTGGCTAACTACTTGAGCAAAGATGGTGATGAAGGGATTCCACTTCCACAGGATTATTTACATGCTTTAGATGTTGTTTTGAGGGAAAGTCCAACCGAGAAATGTATACCTGTTGGAAGGTCATTCTATTCGAGTTCGATGGGAAGAGGCAAAGATATTGGTGGAGGAGCTGTTGGATTGAGAGGCTTTTTTCAGAGTCTTAGACCAACTCAACAAGGACTTGCTCTCAATGTTGATTTTTCGGTAACTGCTTTCCATGAAAGTATAGGAGTTATTCCGTATTTGCAGAAACGTCTCGAGTTTCTTAGAGACCTTTCTCAAAGGAAGACAACTCAGCTAACTTGTGAAGAAAGGAAAGAAGTGGAGAAAGCATTGAAGAACATTAGAGTCTTTGTTTGCCATAGAGAAACTGTTCAGAGATACCGTGTCTACGGTTTAACCGAGGAGGCAACTGAAAATATTTGGTTTCCGGATAGAGACGGAAAGAATCTGAGGCTAATGAGTTACTTTAAAGACCACTATAACTATGATATTCAATTCAGAAAGTTACCATGCTTGCAAATTAGTAGGAGTAAACCTTGTTATCTCCCTATGGAGCTCTGTGTGATCTGTGAAGGACAGAAGTTCCTTGGGAAACTGTCGGATGATCAGACGGCAAAAATACTGAAGATGGGCTGTCAAAGACCGGGAGAACGAAAAGCCATCATCGAAGGAGTCATGAGAGGAAATGTTGGTCCTACCAGTGGTGACCAGGAAGGGGAATTCAAACTCCAAGTCTCAAGAGAAATGACAAAGTTGACTGGGAGAATTCTTTACCCTCCTAAACTAAAGCTCGGAGACGGAGGTCATGTGAGAAACCTAACTCCTTCACGTCACGATCGCCAGTGGAACCTACTAGATGGCCATGTCTTTGAAGGAACAACAATTGAAAGATGGGCACTAATAAGTTTTGGAGGCACACCCGAGCAAAAATCTCATATCCCAAGATTCATAAACCAGTTAACTCAAAGATGCAAACAATTAGGCATTTTTCTTAATAAGAACACAGTTATTAGTCCGCAGTTTGAATCAATCCAAGTTCTTAACAATGTTACGCTTTTGGAATCTAAGCTCGATAGAATCCAAAGGATTGCCTCAAACAAGCTACAGCTTCTTATTTGTATAATGGAGAAAAAACACAAAGGGTATGGAGACTTGAAACGAATTGCCGAGACAAGTGTTGGTGTTGTAAGCCAATGCTGCTTATATCCAAATCTCATCAAATTAAGTTCACAGTTTTTGGCTAATTTGGCTCTCAAGATCAATGCTAAAGTCGGTGGATGCACAGTTGCTTTGTACAACTCGCTTCCTTCTCAACTACCACGTCTTTTCAACATCGATGAACCAGTGATGTTCATGGGAGCCGATGTGACACATCCTCATCCTCTCGACGATTCGAGTCCATCTGTTGCTGCTGTTGTTGGTAGCATGAATTGGCCAACAGCAAATAAATATATTTCAAGAATAAGGTCTCAAACACATAGACAAGAAATCATCGCAGATCTCGGTGCAATGGTTGGAGAATTGCTCGACGATTTTTATCAAGAAGTAGAAAAACTGCCCAACAGAATAATTTTCTTCCGAGACGGTGTTAGCGAAACTCAATTTCACAAAGTGCTACAAGAGGAACTTCAATCCATAAAACAAGCATGTTCTTCAAGGTTTCATGGTTATAAACCTTTTATTACTTTTGTAGTTGTACAAAAGAGACATCACACAAGGTTGTTTCCTGCTGACACTGATCAATCTTCGACGCAGAACAATTTTCATTTTCAATATGAAAATATTCCTCCAGGGACTGTGGTTGATTCTGTGATTACTCATCCAAAGGAATTTGATTTCTATCTGTGTAGTCATTGGGGTGTGAAGGGAACAAGTAGGCCAACTCATTACCATGTTTTGTCGGATGAAAATCAGTTCACTTCCGACGAACTGCAGAAGCTGGTTTATAATTTGTGCTTTACTTTTGTTAGGTGTACTAAGCCAATTTCTTTGGTTCCTCCTGCATATTATGCACATTTAGCTGCATATAGAGGTAGACTCTACCTCGAGAGATCAGAGTCATTAGGTTTGTTCAGAAGTACTTCTACATTATCAAGAGCTGCCCCTCCAAAGACACCACCTCTACCTAAACTTAGTGAAAACATAAAGAAGCTGATGTTTTACTGCTAG 3090 0.3893 MEQQTQDSTNNTNQNHTTKTTTTLIKTNGTTNSYQHHHHHHHHQYYQQQHHQQHQNQLQQYSTQLGFFNYQRYYPALLPLPSLQQLPLIPSFPQNQNFKLKTHLHKLPCKLNTSPSSNYNLSQLSLAPAPKELQKQTKSSFKEVEEKKLISTRKPQEVIVARRPDSGGQEGHVISLLANHFLVKFDSSQKIYHYNVEITPHPSKDVARAIKHKLVHNNSEILSSALPAYDGRKNLYSPIEFQNDKLEFYISLPIPTSKSTSFYGETNDTNEKHEQHKLFRINIKLVSKIDGKELANYLSKDGDEGIPLPQDYLHALDVVLRESPTEKCIPVGRSFYSSSMGRGKDIGGGAVGLRGFFQSLRPTQQGLALNVDFSVTAFHESIGVIPYLQKRLEFLRDLSQRKTTQLTCEERKEVEKALKNIRVFVCHRETVQRYRVYGLTEEATENIWFPDRDGKNLRLMSYFKDHYNYDIQFRKLPCLQISRSKPCYLPMELCVICEGQKFLGKLSDDQTAKILKMGCQRPGERKAIIEGVMRGNVGPTSGDQEGEFKLQVSREMTKLTGRILYPPKLKLGDGGHVRNLTPSRHDRQWNLLDGHVFEGTTIERWALISFGGTPEQKSHIPRFINQLTQRCKQLGIFLNKNTVISPQFESIQVLNNVTLLESKLDRIQRIASNKLQLLICIMEKKHKGYGDLKRIAETSVGVVSQCCLYPNLIKLSSQFLANLALKINAKVGGCTVALYNSLPSQLPRLFNIDEPVMFMGADVTHPHPLDDSSPSVAAVVGSMNWPTANKYISRIRSQTHRQEIIADLGAMVGELLDDFYQEVEKLPNRIIFFRDGVSETQFHKVLQEELQSIKQACSSRFHGYKPFITFVVVQKRHHTRLFPADTDQSSTQNNFHFQYENIPPGTVVDSVITHPKEFDFYLCSHWGVKGTSRPTHYHVLSDENQFTSDELQKLVYNLCFTFVRCTKPISLVPPAYYAHLAAYRGRLYLERSESLGLFRSTSTLSRAAPPKTPPLPKLSENIKKLMFYC* 1030
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g2024 1029 MobiDBLite consensus disorder prediction 32 58 - -
Tpr2g2024 1029 Pfam Piwi domain 678 987 IPR003165 GO:0003676
Tpr2g2024 1029 MobiDBLite consensus disorder prediction 1 20 - -
Tpr2g2024 1029 SMART Piwi_a_2 677 990 IPR003165 GO:0003676
Tpr2g2024 1029 ProSiteProfiles PAZ domain profile. 389 498 IPR003100 GO:0005515
Tpr2g2024 1029 SUPERFAMILY PAZ domain 376 534 IPR036085 GO:0005515
Tpr2g2024 1029 MobiDBLite consensus disorder prediction 33 48 - -
Tpr2g2024 1029 Pfam N-terminal domain of argonaute 174 320 IPR032474 -
Tpr2g2024 1029 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 116 1028 - -
Tpr2g2024 1029 ProSiteProfiles Piwi domain profile. 677 990 IPR003165 GO:0003676
Tpr2g2024 1029 Gene3D - 563 739 - -
Tpr2g2024 1029 SMART PAZ_2_a_3 389 529 IPR003100 GO:0005515
Tpr2g2024 1029 Pfam Argonaute linker 1 domain 330 379 IPR014811 -
Tpr2g2024 1029 Pfam PAZ domain 392 514 IPR003100 GO:0005515
Tpr2g2024 1029 Gene3D paz domain 375 502 - -
Tpr2g2024 1029 CDD Piwi_ago-like 547 989 IPR045246 -
Tpr2g2024 1029 SUPERFAMILY Ribonuclease H-like 662 990 IPR012337 -
Tpr2g2024 1029 SMART DUF1785_2 329 381 IPR014811 -
Tpr2g2024 1029 Gene3D - 749 1029 IPR036397 GO:0003676
Tpr2g2024 1029 CDD PAZ_argonaute_like 385 497 - -
Tpr2g2024 1029 PANTHER PROTEIN ARGONAUTE 7 116 1028 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g2024 Tpr-Chr2 24284578 24289883 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g2024 168 1029 Eukaryotic Initiation Factors Gene Family AT1G48410 41.889 0.0 641
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g2024 K11593 - gmx:100797755 1709.89