LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Tpr2g1998	ATGGCGATAATCGAACTATACCCAAAATTCTTCTTCCCCCAAAACCCAATTCCAAAACCCTTCATAAACTCCAATTTCAATCCCAAAAGTAAAAAATCTCATCAAATTTCCAAACCAATTGCTCAATTTTCTCATCAACCAACAACTACCACCTCAGACCGTGGCATAATTTTCCGGGAAAAAGTTCTTTACCTCGAGAAACTGAAAGTGAACCCAGAAAAAGCCTTCAAACAAAACCCTAATCTTCGATGTGTTCCTCTAAGAACCCTAGAAGCGGTTGAACAGTGTCTTTCAGCAATTGGCATACAGAGAAGCCAAATGGGTCGAATTCTCGATATGCTTCCTCAACTTCTCACGTGTGAACCACACAATGACATTTACCCTATTCTTGATTTTCTTCTCGATGAGGTTGAAATTCCTTACCATGATGTACAAAAATCAATCTTGCGGTGTCCTAGATTGTTGGTTAGTAGTGTTGAGAATCGATTAAGACCTGCACTTTGTTTTTTGAGGGAATTAGGGTTTGTTGCGCCACATTCTCTCACGTGCCAAACTACATTGCTTTTGGTTTCAAGTGTTGAGGATACCCTTATGCCTAAAGTTGAGTTTTTGATGAGTTTGGGGTTCACACGTGCTGAGGTTTCGAAAATGGTTTTGAGGTCACATGGGTTGTTGACTTATAGTGTGGCTAATAATTTGGTTCCAAAACTTGATTTTTTCTTGAATGAGATGAAGGGTGATGTTGCTGAATTGAAGAGGTTTCCTCATTTTTTCTCTTTTAGCTTGGAAGGGAGGATTAAGCCGAGACACGCTATGTTGGTTCGGCTTGGTTTGTCGCTTCCTTTGCGAGAAATGTTGCAGGTTAGTGATGGAGGATTTGAGTCTAGGTTGCTTGAATTTCGGTTTAGTGAACTTGATGTACATTCAGGGTAG	933	0.4019	MAIIELYPKFFFPQNPIPKPFINSNFNPKSKKSHQISKPIAQFSHQPTTTTSDRGIIFREKVLYLEKLKVNPEKAFKQNPNLRCVPLRTLEAVEQCLSAIGIQRSQMGRILDMLPQLLTCEPHNDIYPILDFLLDEVEIPYHDVQKSILRCPRLLVSSVENRLRPALCFLRELGFVAPHSLTCQTTLLLVSSVEDTLMPKVEFLMSLGFTRAEVSKMVLRSHGLLTYSVANNLVPKLDFFLNEMKGDVAELKRFPHFFSFSLEGRIKPRHAMLVRLGLSLPLREMLQVSDGGFESRLLEFRFSELDVHSG*	311

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Tpr2g1998	310	PANTHER	CGI-12 PROTEIN-RELATED	33	306	IPR003690	GO:0003690\|GO:0006355
	Tpr2g1998	310	Pfam	mTERF	74	175	IPR003690	GO:0003690\|GO:0006355
	Tpr2g1998	310	Pfam	mTERF	143	294	IPR003690	GO:0003690\|GO:0006355
	Tpr2g1998	310	Gene3D	Transcription termination factor 3, mitochondrial	73	308	IPR038538	-
	Tpr2g1998	310	PANTHER	TRANSCRIPTION TERMINATION FACTOR MTEF1, CHLOROPLASTIC	33	306	-	-
	Tpr2g1998	310	SMART	mt_12	145	176	IPR003690	GO:0003690\|GO:0006355
	Tpr2g1998	310	SMART	mt_12	108	140	IPR003690	GO:0003690\|GO:0006355
	Tpr2g1998	310	SMART	mt_12	248	279	IPR003690	GO:0003690\|GO:0006355
	Tpr2g1998	310	SMART	mt_12	179	210	IPR003690	GO:0003690\|GO:0006355
	Tpr2g1998	310	SMART	mt_12	215	247	IPR003690	GO:0003690\|GO:0006355

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Tpr2g1998	Tpr-Chr2	23848278	23856032	Transposed

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TR	mTERF	Tpr2g1998		mTERF	2.3e-30	No_clan

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Tpr2g1998	K15032		-	gmx:100785219	365.155