Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g1992 ATGAAGAATCGAAGTATGCATTTTGTTCTATCAACTGATTCAAAACCAAGACTCAAATGGACTCATGATCTTCACCAAAGATTCATTGATGCAATCAATCAACTTGGAGGTGCAGATACAACACCAAAGAGTATAATGAGGGTGATGGAAATTCCAGGACTTACTTTGTACCATCTCAAGAGCCATTTACAGAAATATCGACATGGGAAAAGCCAACAGCTAGAAACCTGTTCTGACAACAAACAACAAGATTACACAGAAACCAAGAGTAATGATGATCATTGTAGCAGAGAAATCAGTCTTGGGGACCAAAGTCAAATCACTGAAAACTTGGAGATAGCTCAAGCTCTAGAAATGCAAATGGAAGTAGAGAAGAAACTTTATGAACAAATTGAGGTGCAGAAACATTTGCAGCGTCGAATCGAAGCTCAAGGAAAGTATTTACAATCGGTACTAACGAAGGCACAAGAAGCACTTTGTGGACACAATTCTTCTCCAATTGGTATAAGACTCACAAAAGATGAACTCTCTCAATTGGTCACCATGGTCAACAATGCATGTCCAAGTTCACCAATCTCAGAACTAACAGAAACAAGAGAAATAAGCTTAAACTGTGGTAAGAGGAAACAGAATAATGAAACTATGTGTTCACTAGAAAGTTCTTTGACATCTTCTGAAAGCTCGGAAAGAAAAGAAGAGAAATCAGTGTCGCGTCTGATGTCTGTGTCTGTGGATCGTATTGATGATTCGTCTGATGAAGCTAATGGGAAAAAGAGAAATGCTGAAACTAAATTTGATAGTGGCTATGTTGAGGAATCTTCATACAGGAAAAGATGTGGCAACAAGTTGAAGAAAGCTATGTCAGAAGAAATGTTTGACTTGAATAGTCAATGTCAGAATGATATGGAATCAACAAGCTCAAAAACATTACTATTAGACTTAAATTGCAGTTTAAACTTTTGTGAACCATGA 972 0.3714 MKNRSMHFVLSTDSKPRLKWTHDLHQRFIDAINQLGGADTTPKSIMRVMEIPGLTLYHLKSHLQKYRHGKSQQLETCSDNKQQDYTETKSNDDHCSREISLGDQSQITENLEIAQALEMQMEVEKKLYEQIEVQKHLQRRIEAQGKYLQSVLTKAQEALCGHNSSPIGIRLTKDELSQLVTMVNNACPSSPISELTETREISLNCGKRKQNNETMCSLESSLTSSESSERKEEKSVSRLMSVSVDRIDDSSDEANGKKRNAETKFDSGYVEESSYRKRCGNKLKKAMSEEMFDLNSQCQNDMESTSSKTLLLDLNCSLNFCEP* 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g1992 323 Pfam Myb-like DNA-binding domain 17 67 IPR001005 -
Tpr2g1992 323 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 15 69 IPR006447 GO:0003677
Tpr2g1992 323 MobiDBLite consensus disorder prediction 214 260 - -
Tpr2g1992 323 Coils Coil 114 134 - -
Tpr2g1992 323 MobiDBLite consensus disorder prediction 74 96 - -
Tpr2g1992 323 Pfam MYB-CC type transfactor, LHEQLE motif 112 157 IPR025756 -
Tpr2g1992 323 Gene3D - 12 72 - -
Tpr2g1992 323 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 12 71 IPR017930 -
Tpr2g1992 323 PANTHER MYB-LIKE TRANSCRIPTION FACTOR FAMILY PROTEIN 2 317 - -
Tpr2g1992 323 SUPERFAMILY Homeodomain-like 14 68 IPR009057 -
Tpr2g1992 323 MobiDBLite consensus disorder prediction 225 260 - -
Tpr2g1992 323 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 2 317 IPR044848 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g1992 Tpr-Chr2 23755567 23757609 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g1992 6 198 G2-like Transcription Factor Family AT1G69580 57.426 1.14e-69 218
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Tpr2g1992 Myb_DNA-binding 6.9e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g1992 - - mtr:MTR_5g041350 461.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g1992 2 23755567 23757609 Tpr2g1992 2 23755567 23757609 ECH