Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g1990 ATGGCTTCTGAAGCTGAAATTTCTGAACTTTCATCTCTTTTTGAAAGAATGATCAGTAACAGAGACATGTCTCTGTTTTTACCCTTCATCTTTGGTCTTTCAGAATCTTCATCAATTTCAAGAAACAACAACGACCCAGATCAAGAATCTGAGAGTAACGATGATTCCAACCGTCAAAGAATAATCTTGGTGAATCCCTTAACACAACGTATGATTGTGATTGAAGGAGTTTCAAGTCTTGAAGGTTTGTTAAATCAAGTTGGGAGTAGCAAGAATGGTCAACCACCAGCTTCAAAGGAGTCAATTGAAGCTATGGAGAAAGTTGAAATTGGAGAAGGTGATGTTGGTAGTGAGTGTGTTGTTTGTTTGGAGGAATTTGAGGTTGGTAGGGTTGTTAAAGAGATGCCTTGTAAACATAGGTTTCATGGTGATTGTATTGAGAAGTGGTTAGGGCTTCATGGGTCTTGTCCTGTTTGTAGGTATCAAATGCCTGTTGATGAGAAAGGTGATGGAAACAAAAGTGATGGAGAAGAAGAAGGTGGAGAGAGAAGAAGGGTTGGTGGTGGTGGCAATGGTACTAATGGTAATGGTGGTGGTGAAGTTTGGGTTAGTTTTTCTCTTAATAGGAGGAGTAGGGAAAATCAAGATCAAAATCAAAATCAAGCTACTTCTGGTGATGATGATGCTGAGGTTGAGAATTAA 702 0.3917 MASEAEISELSSLFERMISNRDMSLFLPFIFGLSESSSISRNNNDPDQESESNDDSNRQRIILVNPLTQRMIVIEGVSSLEGLLNQVGSSKNGQPPASKESIEAMEKVEIGEGDVGSECVVCLEEFEVGRVVKEMPCKHRFHGDCIEKWLGLHGSCPVCRYQMPVDEKGDGNKSDGEEEGGERRRVGGGGNGTNGNGGGEVWVSFSLNRRSRENQDQNQNQATSGDDDAEVEN* 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g1990 233 MobiDBLite consensus disorder prediction 168 185 - -
Tpr2g1990 233 MobiDBLite consensus disorder prediction 168 233 - -
Tpr2g1990 233 PANTHER - 9 175 - -
Tpr2g1990 233 SMART ring_2 119 159 IPR001841 -
Tpr2g1990 233 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 84 166 IPR013083 -
Tpr2g1990 233 ProSiteProfiles Zinc finger RING-type profile. 119 160 IPR001841 -
Tpr2g1990 233 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 9 175 - -
Tpr2g1990 233 SUPERFAMILY RING/U-box 118 165 - -
Tpr2g1990 233 MobiDBLite consensus disorder prediction 197 226 - -
Tpr2g1990 233 MobiDBLite consensus disorder prediction 38 58 - -
Tpr2g1990 233 Pfam Ring finger domain 118 160 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g1990 Tpr-Chr2 23747992 23748905 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g1990 1 218 C3H Transcription Factor Family AT1G26800 50.000 1.22e-59 185
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g1990 - - lang:109356689 264.233
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g1990 2 23747992 23748905 Tpr2g1990 2 23747992 23748905 ECH