Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g1980 ATGCGACGATTGAATGCTCGAAATCGGGTCGATTCAAATCCAAAGCAAATGGATCCAACGGTGAAAAAGCTCCAAATCCGTTCCACAAATCTCTTCGCTCGTAACAACAATAACAATTCAAAATGTTTCTTTTTCAATAACGCTTTCATCGCTTCTCTCTTTTTCTCATTCCTCCTCGTTTTCTCGTATTACACTTTTTTTAGTTCTCCGTTGACCGGAACCGGTTTCCGGTACCGGATTATTATCGACGGTGGAAGTACGGGAACTAGGGTTCATTTATTTAAATATAAGGTTAAAAATGCGTTGGATTTTGGGAAAAAAGGGTTGGATTCGATGAGAGTGAATCCGGGTTTATCATCGTTTGCGGAGGATCCGGATGGAGCGGGTAGGTCAGTTTTGGAGCTGGTGGAGTTTGCGAAAAATCGGATCCCGAAGGAGAGCTGGAAGGAGACGGAGATTCGGCTTATGGCTACGGCTGGGATGAGGATGTTGGATGTTGAAGTGCAGGAGAAGATTCTAGATTCTTGTAGGAAGGTTTTGCGTTCTTCTGGATTCAAGTTTAGTGATAATTGGGCTTCTGTGATAACAGGTTCTGATGAAGGAGTGTATGCTTGGGTTGTTGCTAATTATGCACTGGGAACTCTTGGAGGTGATCCTTCGGAGACAACTGGGATTATTGAACTTGGTGGTGCTTCTGCTCAGGTAACCTTTGTATCAAGAGAAGCAATGCTGCCTTTGTTCTCACGCACTGTTAAATTTCGGAATGTCACTTACAACCTTTACAGCCACAGCTTGCTTCATTTTGGCCTGAATGTTGCTCATGACTCATGGAGAGAAGCACTTATATCAGGAGATTTAAACTTGGCTTCTCAATATATTCAGAAGGGATTGCACATAGATCCTTGTACTCCTGCAGGGTACTCTTATAATGTTGATTCATGGAAGTCCTCTCCTAGCTCACACAGTGAAAAAAGCCAATATCAGCCCACTGTCCAAACAAGGGGAAACTTTTCAGAGTGCAGATCTGCAGCATTGATGCTATTACAAAAAGGGAAAGAATCATGTTCTTATCAGCATTGCGACATTGGATCAAATTTTATACCTAAGCTTCAGGGGAAATTTTTGGCTACAGAAAATTTCTTTCACACATCTAAGTTTTTTGGGTTGGGGCCACATGCTTATCTGTCCAAGTTGATGACTGCTGGGCAAGAATACTGTGGAGAGGATTGGTCAAAGCTGAAGAAAAAATATATCTCCCACGATAAGGAAGATTTACTTCGACATTGCTTCTCTTCAGCGTACATTGTTGCTCTGCTTCATGACAGTCTTGGGATTGGTATGGATGATGAGAGGATCAAAGTTGCTAGTCAGGTGGGAAGTATTCCGCTCGATTGGGCTTTGGGAGCTTTTATTATGCAAACTACAGCTGATGCAGATCCACAGAACCATAACTGGATTGCCGCCATTTTCAGCAATGAATCACCCACTCTCTTCTCACTGCTTGGAATTTTTATAATATTGTTGTTTACAGCATGGTCTATATCTAGGTGCTGCAGGAAACCTCAGTTGAAGATTATTTATGACCTAGAAAAGGGACGTTATATAACTACGCGAGTTGGTAGATAA 1626 0.4213 MRRLNARNRVDSNPKQMDPTVKKLQIRSTNLFARNNNNNSKCFFFNNAFIASLFFSFLLVFSYYTFFSSPLTGTGFRYRIIIDGGSTGTRVHLFKYKVKNALDFGKKGLDSMRVNPGLSSFAEDPDGAGRSVLELVEFAKNRIPKESWKETEIRLMATAGMRMLDVEVQEKILDSCRKVLRSSGFKFSDNWASVITGSDEGVYAWVVANYALGTLGGDPSETTGIIELGGASAQVTFVSREAMLPLFSRTVKFRNVTYNLYSHSLLHFGLNVAHDSWREALISGDLNLASQYIQKGLHIDPCTPAGYSYNVDSWKSSPSSHSEKSQYQPTVQTRGNFSECRSAALMLLQKGKESCSYQHCDIGSNFIPKLQGKFLATENFFHTSKFFGLGPHAYLSKLMTAGQEYCGEDWSKLKKKYISHDKEDLLRHCFSSAYIVALLHDSLGIGMDDERIKVASQVGSIPLDWALGAFIMQTTADADPQNHNWIAAIFSNESPTLFSLLGIFIILLFTAWSISRCCRKPQLKIIYDLEKGRYITTRVGR* 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g1980 541 Gene3D - 77 471 - -
Tpr2g1980 541 PANTHER APYRASE 6-RELATED 35 537 - -
Tpr2g1980 541 CDD NBD_sugar-kinase_HSP70_actin 80 238 - -
Tpr2g1980 541 Pfam GDA1/CD39 (nucleoside phosphatase) family 77 476 IPR000407 GO:0016787
Tpr2g1980 541 Gene3D Exopolyphosphatase. Domain 2 196 459 - -
Tpr2g1980 541 PANTHER ADENOSINE/GUANOSINE DIPHOSPHATASE 35 537 IPR000407 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g1980 Tpr-Chr2 23649154 23661044 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g1980 49 474 Nodulin-like Gene Family AT4G19180 27.193 4.39e-42 159
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g1980 K01510 - gmx:100807287 763.451
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g1980 2 23649154 23661044 Tpr2g1980 2 23649154 23661044 ECH