Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g1970 ATGGTGCAGCGTCTCACCTATCGCAGGCATCATAGCTACGCAACCAAATCCAATCAACACAGGGTTGTTAAAACCCCTGGTGGTAAGCTTGTTTATCAGACTACTAAGAAGAGAGCTAGTGGACCTAAGTGCCCTGTTACTGGCAAGAGAATTCAAGGAATTCCACACTTGAGGCCTACAGAGTACAAGAGATCAAGGTTGCCTAGAAACCGTAGGACTGTTAACTGTGCATATGGTGGTGTTTTGTCTGGAGGTGCTGTTAGGGAAAGGATCATTAGGGCTTTCTTGGTTGAAGAGCAAACGATAGTGAAGAAGGTCCTCAAAATTCCGAAGGCAAAGGAAAAGCTGGTCACAAAGGCATGA 363 0.4573 MVQRLTYRRHHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPTEYKRSRLPRNRRTVNCAYGGVLSGGAVRERIIRAFLVEEQTIVKKVLKIPKAKEKLVTKA* 121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g1970 120 PANTHER - 1 120 - -
Tpr2g1970 120 Gene3D - 1 38 - -
Tpr2g1970 120 PRINTS Ribosomal protein L34 signature 13 26 IPR008195 GO:0003735|GO:0005840|GO:0006412
Tpr2g1970 120 PRINTS Ribosomal protein L34 signature 26 43 IPR008195 GO:0003735|GO:0005840|GO:0006412
Tpr2g1970 120 PRINTS Ribosomal protein L34 signature 44 54 IPR008195 GO:0003735|GO:0005840|GO:0006412
Tpr2g1970 120 PRINTS Ribosomal protein L34 signature 66 88 IPR008195 GO:0003735|GO:0005840|GO:0006412
Tpr2g1970 120 PANTHER 60S RIBOSOMAL PROTEIN L34 1 120 IPR008195 GO:0003735|GO:0005840|GO:0006412
Tpr2g1970 120 ProSitePatterns Ribosomal protein L34e signature. 15 28 IPR018065 -
Tpr2g1970 120 Gene3D - 39 120 - -
Tpr2g1970 120 Pfam Ribosomal protein L34e 1 96 IPR008195 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g1970 Tpr-Chr2 23591065 23610292 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g1970 1 119 Cytoplasmic Ribosomal Protein Gene Family AT1G69620 88.235 6.96e-72 208
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g1970 K02915 - qsu:112022188 221.861