Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g1968 ATGTTTCAGTTGGCTTTTCGATTTTTTGATCAGAATCGTGTTGGCTACATTAGGTTGCAGATTCAACACTTGAGGCCTACAGAGTACAATAGATCAAGGTTGCCTAGAAACCGTTGGACTGTTAACCGTGCATATGGTGGAGTTTTGTCTGGAGGTGCTGTTAGGGAAAGGTTTAAGAACAAGTTTGCAATTACTAATGACAAGGGTAGGCTCTCAAAGGAGGAGATTGAGAAGAAGGTACAAGATGCTGAGAAGTACAAATCGGAGGACGAGGAACACAAGAAAAAGGTGGAGGCCAAAAATGCTCTTGAGAACTATGCCTATAACATGAGGAACACAATCAAGGATGACAACATTGCTTCCAAGTTGTCTGCTGATGATAAGAAGAAGATTGAAGATGCTATTGAGCATGCAATTCAATGGCTGGATGGAAACCAACTTGCAGAGGCTGATGAATTTGAAGACAATAATGAATTGAAGCATCACAAATTTTATTAG 498 0.4036 MFQLAFRFFDQNRVGYIRLQIQHLRPTEYNRSRLPRNRWTVNRAYGGVLSGGAVRERFKNKFAITNDKGRLSKEEIEKKVQDAEKYKSEDEEHKKKVEAKNALENYAYNMRNTIKDDNIASKLSADDKKKIEDAIEHAIQWLDGNQLAEADEFEDNNELKHHKFY* 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g1968 165 Coils Coil 73 93 - -
Tpr2g1968 165 Pfam Hsp70 protein 56 154 IPR013126 GO:0005524|GO:0140662
Tpr2g1968 165 PANTHER HEAT SHOCK COGNATE 70 KDA PROTEIN 2-LIKE 58 156 - -
Tpr2g1968 165 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 34 104 IPR029047 -
Tpr2g1968 165 Pfam Ribosomal protein L34e 21 62 IPR008195 GO:0003735|GO:0005840|GO:0006412
Tpr2g1968 165 Gene3D - 15 72 - -
Tpr2g1968 165 PANTHER HEAT SHOCK PROTEIN 70KDA 58 156 IPR013126 GO:0005524|GO:0140662
Tpr2g1968 165 Gene3D - 73 164 IPR029048 -
Tpr2g1968 165 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 98 156 IPR029048 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g1968 Tpr-Chr2 23587146 23587929 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g1968 59 155 Calmodulin-binding Proteins AT3G12580 86.598 2.54e-50 169
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g1968 K03283 - gmx:100812707 181.8